Fragilariopsis cylindrus: FRACYDRAFT_239522
Help
Entry
FRACYDRAFT_239522 CDS
T04784
Name
(GenBank) Presenilin-domain-containing protein
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fcy01002
]
FRACYDRAFT_239522
Peptidases and inhibitors [BR:
fcy01002
]
Aspartic peptidases
Family A22: presenilin family
FRACYDRAFT_239522
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Presenilin
Ycf1
Motif
Other DBs
NCBI-ProteinID:
OEU16926
JGI:
239522
UniProt:
A0A1E7FFL4
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MVLSALVVVFINTEETIAAGERAFAKTYQIFDLDDNDEDGSTSTSMWRKLGLSLVNTLVI
VTAICFMTFIVVLCYKYKCMKILYGYLVIVTASLLGYFTSSMILVAISIYPWMNPDKLTF
AFLMYNYAAVGTIAIFLPRGIPQWITQGYLIASSVCLAWQLSYFNSWMAWTLLVMLALYD
LFAVLTPCGPLKYLAKMISKEGAPALPGLLYEANLSSGVAKPDNRRNKKAKKNEAQRRRR
QAQQLQHQRRSTSEEPDATAAAAEEKDEEKQPEREDYNYHHDDDNDDNDDNRNNNYVSND
SVEEVSPRRQAVGIPTPITKTTSTTMQFQTTSLIPDDGLSGRQQQIQQFEEQNGLQARGV
MPSQQAQEDLVDMSNTGKVPLVLAKLYKLDVLDIDGILSSTDDNNRPRDQSYYTSEEIRN
GSWTERQLRTEIKVIFPSGRSGTISKAPEQKYDAGVAYIVYDRLGNEEHKFVVTTQGTVM
QVLRRESTENNDDDSTIKLGLGDFIFYSVLVSKAAQYSFTTFAACLLVVLTGLAATLVIL
AIKGKALPALPISIFLGVVTFLWTKTFVQPWIYSMLMSSFYV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggtactatcggcattagtagtagtatttataaacacggaagaaacaatagccgcagga
gaaagggccttcgcaaagacatatcaaatctttgatttggacgataatgatgaagatgga
tcaacgtcaacgtcaatgtggcgaaaactcgggttgtctttggtcaatactttggtaata
gttactgctatttgttttatgacctttatagtggtattgtgttataaatacaaatgtatg
aaaatattgtatgggtatttggtcattgtaacagcctccttactgggttattttacatct
agtatgatcttggtcgcgatatctatttatccatggatgaatcctgataaattaacgttt
gcgttcctgatgtacaattatgcggctgttggaacaattgcaatattccttcccagagga
attcctcaatggattacacaggggtatttgatcgccagtagtgtttgcttagcatggcaa
ttatcttattttaattcgtggatggcgtggaccctgttagtaatgttagcgttatacgat
ctcttcgctgtcctcacaccctgtggaccactcaaatatttagcgaaaatgatttcgaaa
gagggagctccagcgttaccaggtttgttgtacgaagcaaatttatcgagtggagtcgcc
aaaccagataataggcggaataagaaagcgaagaaaaatgaagcgcagcggcggcggcgg
caagcacagcagcttcaacatcagcggcgatctacttcggaggaaccggatgcaacagca
gcagcagcagaagaaaaagatgaagaaaaacaacccgagcgagaagattataattatcat
catgacgacgacaatgacgacaatgacgataatcggaataataattatgtttcgaatgac
tccgtcgaggaagtatctccgcgaagacaagcggtaggaataccaacaccgataacgaaa
acgacatccacaacaatgcaatttcaaacaacgtctttgataccagatgacggactttca
ggacggcaacaacaaatacaacaatttgaagaacagaatggattgcaagcacggggggtg
atgccatcacagcaagcgcaagaagatttggttgatatgtctaacacgggaaaagttcca
ctggtgttggcaaaattatataaactagatgttttagatatagatggaattttatcttcg
actgacgacaataatcgaccacgtgaccagtcttattatacgtcggaggaaattcgcaat
ggctcctggacggagcgacagttacgaaccgagattaaggtgatcttcccttccggaaga
agtgggactatttccaaagctcccgagcaaaagtatgacgctggagttgcatatatagta
tacgatcgactgggaaacgaagaacacaaatttgtcgtcacgacacagggtacagtgatg
caagttctgcggcgcgaatctacggaaaataatgacgacgacagtaccatcaaattgggg
cttggggattttatattttacagtgtcttagtttcgaaggcggcacaatattcattcacc
accttcgctgcgtgtttattagttgtactgacgggcctagctgcgacactggtaatttta
gctatcaagggtaaggcattacccgcattaccaatctcgatatttttgggtgtcgtaacg
tttctctggacaaaaacatttgtccaaccatggatatattctatgcttatgtcatcattc
tacgtctaa
DBGET
integrated database retrieval system
