Fragilariopsis cylindrus: FRACYDRAFT_239548
Help
Entry
FRACYDRAFT_239548 CDS
T04784
Symbol
mSHMT_1
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy00260
Glycine, serine and threonine metabolism
fcy00460
Cyanoamino acid metabolism
fcy00630
Glyoxylate and dicarboxylate metabolism
fcy00670
One carbon pool by folate
fcy01100
Metabolic pathways
fcy01110
Biosynthesis of secondary metabolites
fcy01200
Carbon metabolism
fcy01230
Biosynthesis of amino acids
fcy01240
Biosynthesis of cofactors
fcy04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FRACYDRAFT_239548 (mSHMT_1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FRACYDRAFT_239548 (mSHMT_1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FRACYDRAFT_239548 (mSHMT_1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FRACYDRAFT_239548 (mSHMT_1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FRACYDRAFT_239548 (mSHMT_1)
Enzymes [BR:
fcy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FRACYDRAFT_239548 (mSHMT_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-ProteinID:
OEU17069
JGI:
239548
UniProt:
A0A1E7FFX5
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MFALKSCGLRPTATAVTAARITKSAMRSLSSSSGAYLNRDLSDQDPELLNLIEQEKARQR
NSLVLIASENFTSKAVLQALGSVLSNKYSEGYPGARYYGGNENIDQVELLCQKRALEAFQ
LDPEEWGVNVQSLSGSPANFQVYTALLQTHERILSLDLPHGGHLSHGFQTPTKKISAVSR
YFESMPYQLDPSTGTIDYDQMEKSAELFRPKLIVAGASAYARLIDYERIRNIADGVGAYV
LADMAHISGLVSAKVIPSCFPYADVVTTTTHKSLRGPRGAMIFFRKGQKGVDKKGNPIMY
DLEEKINFAVFPGLQGGPHNHTIGALATCLKQANTPEFVEYQKQVLKNCSRLSDELIKRG
YHLVSGGTDNHLVLVDLKTSRKIDGARVERVLEMACIATNKNTIPGDKSALNPGGIRMGT
PALTSRGLTEDDFTKVAEYFDRAVAIAVDLKENTEEGKKLKGFRKMCTVGPSVHPDLVQL
RKEVSEFACKFPTVGFDESEMAYEGEYNVDFVA
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcactcaaatcttgtggattacgtccaacagcaacagcggtcaccgccgctcga
attacgaagagtgccatgagatcactttcctcatcttctggagcatatttaaatcgtgat
cttagtgatcaagatcctgaacttcttaatttaattgaacaagaaaaggcacgacaacgc
aattcattagttttaattgcgtctgaaaactttaccagtaaggctgtattacaggcatta
gggtccgtcctttcgaacaagtacagtgagggatatcctggtgcacgttattacggagga
aatgaaaatattgatcaagtagaattgttatgtcaaaagcgtgctcttgaggcatttcag
ttagacccagaagaatggggtgttaacgtccaatccttatcaggatcacctgctaacttc
caggtatacacagctcttttgcagacacatgaacgtatcttatctttagatttacctcat
ggaggtcatctttcgcatggatttcaaactcccacgaaaaagatctctgctgtctctcga
tactttgaatctatgccgtaccaactcgatccgtcgacaggaacaatcgattatgatcag
atggaaaaaagtgctgaactatttcgtcctaaattgattgtggctggtgcatctgcgtat
gcacgtttgattgattatgaacgtatccggaacattgccgatggtgtaggtgcatatgta
ttagcagatatggcacatatttctggtcttgtttctgctaaggttattccgtcctgtttc
ccatatgccgatgttgtaacgaccacaactcacaaatctcttcgtggtcctcgtggtgca
atgatcttcttccggaaaggacaaaagggtgttgacaagaagggtaatcctatcatgtat
gatttagaagaaaagattaactttgcagtatttcctggtctacagggtggtcctcacaac
catacgatcggtgctcttgcaacatgcttaaaacaggcgaatacacctgaatttgtggaa
tatcaaaagcaggtccttaaaaattgttctcgtctctctgatgaattaatcaagagaggg
tatcacttggtcagtggtggaactgataaccatcttgttttggtcgatttgaagacctcc
cgaaagatcgatggagcacgcgtcgaacgggtattggagatggcatgtatcgctactaac
aaaaatacgatcccaggtgataaatctgcattgaatcctggtgggatccgaatgggaaca
ccagcattgacctcacgaggacttacagaagatgactttacgaaggttgccgaatacttt
gatcgggctgtagcaattgcagtagatttaaaggagaatacagaagaaggtaaaaaatta
aagggatttagaaaaatgtgtaccgttggaccatctgtccatcccgatttggtgcaacta
cgaaaggaggtatcggaatttgcctgtaaatttccaacagttggattcgatgaaagtgaa
atggcatatgaaggagaatacaacgttgactttgttgcataa
DBGET
integrated database retrieval system