Fragilariopsis cylindrus: FRACYDRAFT_239581
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Entry
FRACYDRAFT_239581 CDS
T04784
Name
(GenBank) hypothetical protein
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcy03019
]
FRACYDRAFT_239581
Messenger RNA biogenesis [BR:
fcy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
FRACYDRAFT_239581
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
AXH
Motif
Other DBs
NCBI-ProteinID:
OEU16984
JGI:
239581
UniProt:
A0A1E7FFR1
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MDPKSSQRQRQPQRQRQAIPLSLNKASLRMRLEAYYSLISPETLSADHRTVWLRKYDQIY
EKYGGTHEGERKLGSKLAKKYGTAVRLLVVTADDDDSSNSNNNKTTTTTTLQQDNQKYEE
EWYKLRPNEAGSKIVNFLSSDFDPVAALTISSSNLLNSEEDEVYKANPWLVSSSSSSTSS
SINIIVSTTMMDNVEKCATLLPEEDPLHRDTHQQLQLKKNNYQATNKRGQLLLIGIGNNN
NQTNSSSNKRPRKNDMNDTSSSSFVHPFESIASHLDSGPHSVLYKLRNNGPQKRITIVIR
YVNMIRGTLTGTLIAFDKHMNMILRDVEEIYSPRLIDEENEKSNLDLEVERRRRLHSSTN
NNDPTTTTMAIQQQQQQSGIWNVRRRQMKQLLVRGDMVVSVYEATTTGSKKKASNDVVVK
SRYYKKKGKTK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaaaagcagtcaacgtcaacgtcaaccacagcgacagcgacaggcgattccg
ttatcattgaacaaagcgtccctgaggatgcgtctagaagcatactatagtttaatttct
cctgaaacactctctgctgatcatcgaactgtatggttacgcaaatatgatcaaatatat
gaaaaatatggtggtactcatgagggtgaacgaaaattaggatccaaattggcaaagaaa
tacggtacggctgttcgactacttgtagttactgccgacgatgacgacagtagtaatagt
aataataacaagacgacaacgacgacaacactccaacaagataatcaaaaatacgaagaa
gaatggtataaactacgtccaaatgaagctggtagtaaaattgttaactttttatcatct
gattttgatcctgttgccgcccttacaataagtagtagtaatctcttgaatagtgaagaa
gacgaagtatataaagcaaatccctggttggtatcatcatcatcatcatctacttcttcc
tctattaatataatagtgtcaacaacaatgatggataatgttgaaaaatgtgccacccta
ctaccggaggaggatccattgcatcgtgatacacatcagcagttacagcttaagaaaaat
aattatcaagctactaataaaaggggacaacttttacttattggtattggcaacaacaat
aatcaaactaatagtagtagtaataagcgaccccgtaaaaatgatatgaatgatacatca
tcatcatcatttgtccatccctttgagtcaatcgcttctcatttagattcgggaccacat
tctgtattatataaattacgtaataatggtcctcagaaacgtattacaattgttatacga
tacgtcaatatgatacgaggaacattaactggaacgttgattgcatttgataaacatatg
aatatgatattgagagatgtagaagaaatatattctcctcgtctgatcgatgaagaaaat
gaaaaatctaatttagaccttgaagtagaacgacgtcgacgattgcattcatccacgaat
aataacgatccgacgacaacgacgatggcgatacaacagcaacagcaacaatcaggaata
tggaacgtacgaagacgacaaatgaaacaacttttggtgagaggagacatggtagtttcg
gtgtacgaagcgacgactaccggtagtaaaaagaaagctagtaatgatgttgttgtgaaa
tctagatactacaaaaagaagggtaaaacaaaataa
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