KEGG   Fragilariopsis cylindrus: FRACYDRAFT_240351
Entry
FRACYDRAFT_240351 CDS       T04784                                 
Name
(GenBank) hypothetical protein
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    FRACYDRAFT_240351
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fcy03021]
    FRACYDRAFT_240351
   03036 Chromosome and associated proteins [BR:fcy03036]
    FRACYDRAFT_240351
Transcription machinery [BR:fcy03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     FRACYDRAFT_240351
   Coactivators
    SAGA/TFTC/STAGA complex
     FRACYDRAFT_240351
Chromosome and associated proteins [BR:fcy03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     FRACYDRAFT_240351
    STAGA complex
     FRACYDRAFT_240351
    TFTC complex
     FRACYDRAFT_240351
    SAGA complex
     FRACYDRAFT_240351
    SLIK complex
     FRACYDRAFT_240351
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone
Other DBs
NCBI-ProteinID: OEU15657
JGI: 240351
UniProt: A0A1E7FBX1
LinkDB
Position
Unknown
AA seq 681 aa
MRPAEDMFDGEIAVWTDLEIIIEIAQDDTLEQRTHECSGCYNSRTRLAGRIFTLSQLSVK
WLQDWHPSTHGDMSSGGKGGKSLELMQRRLLSGEGQQQQQNDQTPPTQTSQAATQASTTQ
APATTTATAPVPAPAPAPVLAGRPKGKDFNAMANRLGGPPPNSSPVAPAVPAPAPAPPAA
AAASKVKVKGKDFSAMANRAGMPPAPPAMGGGGSVVPATQQTDAARRRAQQMQAAARAAA
GLPPLDSPTAQPTGSPPPISTLVGSPVQASQQQQQQGQLPNQLQQPQQPQQHHSVGGSTS
RSQPPQSLQPVQQHQQHQYQQQQSPPKTQQQQQQPPQQQQHQQHSPQQAIPSARYGRQPQ
QQQQFQQQHPPQQKPQMTHNTNQPPLQQQQHIQQQPPQQQQQAPPKQVQQQLQQPQPPPQ
KQVQQQQPPPQIPQPKPTVAVAARKVTASKQGGKAVQRKASKTSLTGAASRRGSKTTKST
AEDLANKTSPEPTTAEGRLSLTATTAISNRGSGKKVSVKGGGSGPHMAPLVGPRIADLVR
SIDPNYGIEPDAEEQVLQLADDFLDKVTKQAIRLAQHRGSKTLEVRDLQIVLAKNFGIVV
PGLGMPPARSINRSSVTSKTSATASGSNSKSSSSSTSGPGSATKRNSSTSIGGETTNSAR
KKANISSQEGAVSGGASASII
NT seq 2046 nt   +upstreamnt  +downstreamnt
atgagaccagcagaagacatgtttgatggtgaaattgctgtctggactgacctagagata
ataattgagattgctcaagatgatacacttgaacagcggacacatgaatgctcaggttgt
tacaatagtagaacaagactggcaggcagaattttcactcttagtcagttgtcagtaaaa
tggctgcaagactggcatccatcaacacatggtgacatgtcgagtggagggaaaggaggg
aaatctcttgagctcatgcagcggcggctgttgagcggagaaggccaacaacagcaacaa
aatgatcaaacgccacctacccaaacatcgcaagcggctacacaagcgtctacaacacag
gcgccagcaacaactacagcgacagcaccagtaccagcgccagcaccagcaccagtacta
gcaggacgacccaaaggaaaagacttcaatgcaatggcgaaccgtttgggaggtcctcct
cctaattcatctccagtcgcacctgctgtacctgctcctgcacctgctcctcctgccgct
gccgctgcctccaaagtaaaagtcaaggggaaagatttttccgcaatggctaatcgagct
ggaatgcccccggctcctccagcgatgggaggaggaggaagcgttgttccagctactcaa
caaacggatgctgctcgacgacgagctcaacaaatgcaagcggcggctcgagcggcagct
gggctaccaccactcgacagtcccaccgcccaacctaccggtagtccaccaccgatcagc
acattagttggttctcccgttcaggcttcgcagcagcaacagcaacaggggcaactgccc
aaccagcttcaacagccacaacaaccacaacaacatcacagtgtgggaggaagtactagt
cgaagccaaccaccacaatcacttcaacctgtacaacagcatcagcaacatcaataccag
cagcagcaatcaccaccaaaaactcagcagcagcagcagcaaccgccacaacaacagcag
catcaacaacactcgccacaacaagcgattccgagtgcccgttatggtcgtcaaccccag
caacagcaacaatttcaacaacaacacccaccgcaacaaaaaccgcagatgacgcacaat
actaatcagccgccgctgcagcagcagcaacatatacagcaacaaccaccgcaacagcaa
cagcaagcaccaccaaagcaggtgcagcaacagctacagcaaccgcaaccaccaccacaa
aagcaggtacagcaacagcaaccaccaccgcaaattcctcaaccaaaacctaccgtcgca
gtggcggctagaaaggtgacagcatccaaacagggaggaaaagctgtacaacgtaaagct
agtaaaacatccttgaccggtgctgctagtcgacgaggatccaagactaccaagtcgacg
gctgaggatctcgctaataagacatccccggaacctactaccgcggagggtcgtctctcc
ttgactgctaccaccgctattagtaatcgaggtagcgggaagaaggtatccgtcaagggt
ggtggatcaggaccacatatggcaccgttagtcggtccacgaattgctgatttggttcga
tcaattgatcccaattatggtatcgaacctgatgcagaagagcaggtattgcaacttgcg
gatgatttcttagacaaggtaacaaagcaggctatccgattggctcaacatcgtggatct
aaaactcttgaagtacgagatttgcaaatcgtccttgcaaagaactttggtattgtcgtt
cctggacttggtatgcctcccgctcgttccatcaatcgttcgtcagtaacgagcaagact
tcggcaacagcaagtggatccaacagcaaatcgtcatcatcatcaacatcaggaccggga
tcggcgacgaaacgtaattcttctacctccatcggcggagaaacaactaatagtgcccgt
aaaaaggcaaacattagttctcaggaaggtgctgtaagtgggggagcgtcggcatctatt
atctaa

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