Fragilariopsis cylindrus: FRACYDRAFT_240351
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Entry
FRACYDRAFT_240351 CDS
T04784
Name
(GenBank) hypothetical protein
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FRACYDRAFT_240351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fcy03021
]
FRACYDRAFT_240351
03036 Chromosome and associated proteins [BR:
fcy03036
]
FRACYDRAFT_240351
Transcription machinery [BR:
fcy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
FRACYDRAFT_240351
Coactivators
SAGA/TFTC/STAGA complex
FRACYDRAFT_240351
Chromosome and associated proteins [BR:
fcy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
FRACYDRAFT_240351
STAGA complex
FRACYDRAFT_240351
TFTC complex
FRACYDRAFT_240351
SAGA complex
FRACYDRAFT_240351
SLIK complex
FRACYDRAFT_240351
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-ProteinID:
OEU15657
JGI:
240351
UniProt:
A0A1E7FBX1
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MRPAEDMFDGEIAVWTDLEIIIEIAQDDTLEQRTHECSGCYNSRTRLAGRIFTLSQLSVK
WLQDWHPSTHGDMSSGGKGGKSLELMQRRLLSGEGQQQQQNDQTPPTQTSQAATQASTTQ
APATTTATAPVPAPAPAPVLAGRPKGKDFNAMANRLGGPPPNSSPVAPAVPAPAPAPPAA
AAASKVKVKGKDFSAMANRAGMPPAPPAMGGGGSVVPATQQTDAARRRAQQMQAAARAAA
GLPPLDSPTAQPTGSPPPISTLVGSPVQASQQQQQQGQLPNQLQQPQQPQQHHSVGGSTS
RSQPPQSLQPVQQHQQHQYQQQQSPPKTQQQQQQPPQQQQHQQHSPQQAIPSARYGRQPQ
QQQQFQQQHPPQQKPQMTHNTNQPPLQQQQHIQQQPPQQQQQAPPKQVQQQLQQPQPPPQ
KQVQQQQPPPQIPQPKPTVAVAARKVTASKQGGKAVQRKASKTSLTGAASRRGSKTTKST
AEDLANKTSPEPTTAEGRLSLTATTAISNRGSGKKVSVKGGGSGPHMAPLVGPRIADLVR
SIDPNYGIEPDAEEQVLQLADDFLDKVTKQAIRLAQHRGSKTLEVRDLQIVLAKNFGIVV
PGLGMPPARSINRSSVTSKTSATASGSNSKSSSSSTSGPGSATKRNSSTSIGGETTNSAR
KKANISSQEGAVSGGASASII
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgagaccagcagaagacatgtttgatggtgaaattgctgtctggactgacctagagata
ataattgagattgctcaagatgatacacttgaacagcggacacatgaatgctcaggttgt
tacaatagtagaacaagactggcaggcagaattttcactcttagtcagttgtcagtaaaa
tggctgcaagactggcatccatcaacacatggtgacatgtcgagtggagggaaaggaggg
aaatctcttgagctcatgcagcggcggctgttgagcggagaaggccaacaacagcaacaa
aatgatcaaacgccacctacccaaacatcgcaagcggctacacaagcgtctacaacacag
gcgccagcaacaactacagcgacagcaccagtaccagcgccagcaccagcaccagtacta
gcaggacgacccaaaggaaaagacttcaatgcaatggcgaaccgtttgggaggtcctcct
cctaattcatctccagtcgcacctgctgtacctgctcctgcacctgctcctcctgccgct
gccgctgcctccaaagtaaaagtcaaggggaaagatttttccgcaatggctaatcgagct
ggaatgcccccggctcctccagcgatgggaggaggaggaagcgttgttccagctactcaa
caaacggatgctgctcgacgacgagctcaacaaatgcaagcggcggctcgagcggcagct
gggctaccaccactcgacagtcccaccgcccaacctaccggtagtccaccaccgatcagc
acattagttggttctcccgttcaggcttcgcagcagcaacagcaacaggggcaactgccc
aaccagcttcaacagccacaacaaccacaacaacatcacagtgtgggaggaagtactagt
cgaagccaaccaccacaatcacttcaacctgtacaacagcatcagcaacatcaataccag
cagcagcaatcaccaccaaaaactcagcagcagcagcagcaaccgccacaacaacagcag
catcaacaacactcgccacaacaagcgattccgagtgcccgttatggtcgtcaaccccag
caacagcaacaatttcaacaacaacacccaccgcaacaaaaaccgcagatgacgcacaat
actaatcagccgccgctgcagcagcagcaacatatacagcaacaaccaccgcaacagcaa
cagcaagcaccaccaaagcaggtgcagcaacagctacagcaaccgcaaccaccaccacaa
aagcaggtacagcaacagcaaccaccaccgcaaattcctcaaccaaaacctaccgtcgca
gtggcggctagaaaggtgacagcatccaaacagggaggaaaagctgtacaacgtaaagct
agtaaaacatccttgaccggtgctgctagtcgacgaggatccaagactaccaagtcgacg
gctgaggatctcgctaataagacatccccggaacctactaccgcggagggtcgtctctcc
ttgactgctaccaccgctattagtaatcgaggtagcgggaagaaggtatccgtcaagggt
ggtggatcaggaccacatatggcaccgttagtcggtccacgaattgctgatttggttcga
tcaattgatcccaattatggtatcgaacctgatgcagaagagcaggtattgcaacttgcg
gatgatttcttagacaaggtaacaaagcaggctatccgattggctcaacatcgtggatct
aaaactcttgaagtacgagatttgcaaatcgtccttgcaaagaactttggtattgtcgtt
cctggacttggtatgcctcccgctcgttccatcaatcgttcgtcagtaacgagcaagact
tcggcaacagcaagtggatccaacagcaaatcgtcatcatcatcaacatcaggaccggga
tcggcgacgaaacgtaattcttctacctccatcggcggagaaacaactaatagtgcccgt
aaaaaggcaaacattagttctcaggaaggtgctgtaagtgggggagcgtcggcatctatt
atctaa
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integrated database retrieval system