Fragilariopsis cylindrus: FRACYDRAFT_240894
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Entry
FRACYDRAFT_240894 CDS
T04784
Name
(GenBank) hypothetical protein
KO
K14764
protein SHQ1
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcy03009
]
FRACYDRAFT_240894
Ribosome biogenesis [BR:
fcy03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
FRACYDRAFT_240894
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
Motif
Other DBs
NCBI-ProteinID:
OEU14354
JGI:
240894
UniProt:
A0A1E7F8B0
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MPLTPRFTLSQTPTHIYVEINVPSFRLSAEIDGGMEVVLMGNNNSEFHFYAKPYLLKLNF
FPNSFEDQDTNESSGIESGGVGTAKYDPSEQTVTIPLRKKKIQEEDISKGEEEESESESN
NNFWSDLELTARLIEPKEIPKKWLHSVIDNNNVGGGEEDGDNDDDLEEELNDDGDDTSTS
TKPNNNTNPLLLPDHQQNNGDGYGFNNMFRNIFTDYCRSGLSEEMLMLRIDPESSTVEER
RLERHTKEEKDFDFDRYLNDLDLTQDDYMYPMVMLYKPWWYKNNDADADSDDEKAEEEKA
EKAEEEGVVELIADEMQSKLNVTAAATTAATADNNSSGITPTTVGIKKKKKNDDSTSSSS
SSLFTDNEKLLLSTIPYPLLSTSTTGVGERKYELWCGLLEILLAYTYDHITTMGDSTVES
SWTITVLTSGMSYLESPTSVEEVLHSFLRRVAIYPYWRNIEEFGVYIIKQTLEILHTHGI
HGITKCLVQAHTILEKSESHYLSNKLYIDPYLYWVQRLERDCGNEGLTRIILEIESSILT
VQPDEDNILVTEVQNSLGIDTLMDRFFQTDSETSDNSSESSDSEEEEEDNEVGDSGGGGG
GGSLYGGVSVGGASPSLITEIIQSSNKKVGNNPLIQEL
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgccattaacaccaagatttacattaagtcaaacaccgacacatatctatgttgaaatc
aatgttccatcatttcgtttgtcagccgaaattgatggtggcatggaagtggtattgatg
ggcaacaataattctgaatttcatttttatgcgaaaccatatttattgaaattgaatttc
tttccaaattcatttgaagatcaggacaccaacgaatcatctggtattgaatctggtggt
gtcggtacagcgaaatatgatccatcagaacaaacagttactataccattgcgaaagaag
aagattcaagaagaagatatctcaaaaggtgaggaagaggaatctgaatctgaatcgaat
aataacttttggtcagatttagaattaacagcacgattaattgaaccaaaagaaataccc
aaaaaatggttgcattccgttattgacaataacaatgtaggaggaggagaagaagatggg
gataacgatgacgatttggaggaagaattgaatgacgacggcgacgataccagtacatca
actaagccgaataataatactaatccactcctattaccagatcatcaacaaaataatggt
gatgggtatggcttcaataatatgtttcgtaatatatttacagattattgtagaagtggt
ttatcagaagaaatgttaatgttacgtattgatcccgaatcatcaacggtagaagaacgt
cgattagaaagacataccaaggaagaaaaagattttgactttgatagatatttaaatgat
ttagatttaacacaagatgattacatgtatccaatggtgatgttgtataaaccatggtgg
tataagaataatgatgctgatgctgattctgatgatgagaaggcggaggaggagaaggcg
gagaaggcggaggaggaaggagtagtcgaattaatagcagatgaaatgcaatcgaaattg
aatgtcactgctgctgctactactgctgcaacagcagacaacaattcttctggtattaca
ccaacaacggtcggtataaaaaagaagaagaagaatgatgattcaacatcatcatcgtca
tcatcattgtttacagataatgaaaaattgttactttctacaataccatatccattacta
tctacatcaaccacaggagtaggagaaagaaagtatgaattatggtgtggtttgttagaa
attctgttagcatatacgtatgatcatataacaaccatgggtgattccactgttgaatcg
tcatggacgatcactgtattaacatccggtatgtcctatttagaaagtccaacatcggta
gaagaagtattgcattcattcttacgacgtgttgcgatatatccatattggagaaatatt
gaagaatttggtgtctatataattaaacaaacattagaaatactacatacgcatggtata
catggtataaccaaatgtcttgtacaggcacatacaatattagaaaaaagtgaatcccat
tatttaagtaataaattatatattgatccatacctctactgggtacaacgtttggaacgt
gattgtggcaatgaaggtttgacaagaattattttagaaatagaatcctccattttaacg
gtacaaccagatgaagataatatacttgtaacagaagtacagaattcattaggtattgat
acattaatggatcgattctttcaaacagattcggaaacatctgacaattcatcagagtct
tctgattcggaggaggaggaggaagataatgaagtcggtgatagtggtggtggtggtggt
ggtggttctttatatggtggtgttagtgttggtggtgcatctccctcgttaatcacggag
ataatacaatcgtccaataaaaaagtaggaaataatccattaatacaagaattgtag
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