Fragilariopsis cylindrus: FRACYDRAFT_241140
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Entry
FRACYDRAFT_241140 CDS
T04784
Name
(GenBank) transcription elongation factor
KO
K03145
transcription elongation factor S-II
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fcy03021
]
FRACYDRAFT_241140
Transcription machinery [BR:
fcy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
FRACYDRAFT_241140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_TFIIS
TFIIS_M
Med26
zf-DNL
Motif
Other DBs
NCBI-ProteinID:
OEU14591
JGI:
241140
UniProt:
A0A1E7F8T5
LinkDB
All DBs
Position
Unknown
AA seq
325 aa
AA seq
DB search
MATIKKIELIKQSMSKKVASGVEILSDDDIETLKDMLQQLESFDVNLEILTKTLIGTIVS
KFKKHEIIGPTAKALVKKWKSIAKGEVTNNNSNNKGEEEEQKPAASAAKTAVAVAAAVKP
KRRNSTNAATAEMREQWFSLQPYRQTTCQKLHDILINTKTSLIKQGINPDAIDHLVVERA
TDVEQSIQAKFLSNKTEYLSKARSLCFNIKKNSSLACQIILGQIPSKKLVDLSSEELVND
KKRKEIEERKKQVMDSNLLDWDTQNEDKINEMCGITGDLLNASLFTCGRCKSTKTTSTQK
QTRSADEPMTVFVLCLACNNRWKFS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgattaagaaaattgaattgataaaacaatccatgtcaaaaaaggtggcatct
ggtgtagaaatactttccgatgatgatattgaaacattaaaggatatgttacaacaactt
gaatcgtttgatgtgaatctggaaatacttactaaaactttaatcggaacgattgtatca
aaatttaaaaagcatgaaataattggtccaaccgctaaagcactcgttaaaaaatggaaa
tcaatagcaaaaggtgaagtgaccaacaacaacagcaacaacaaaggagaagaggaagaa
cagaaacctgcagcatccgcagcgaagacagcagtagcagtagcagcagctgtaaaacct
aaacgaagaaatagtacgaatgcagcaacagcagaaatgcgtgaacaatggttttcatta
caaccctatcgtcagactacgtgtcaaaaattacatgatatattaataaacacaaaaacg
agtctaatcaaacagggcattaatccagatgctattgatcatttagtggtggaacgtgcc
actgatgtggaacaatccatacaagctaaatttttatccaataaaacagagtatttatca
aaggcacgatccttatgttttaatattaaaaaaaattcctcattggcctgtcaaattata
ttaggacaaatcccatcaaagaaattagtagatttgtccagtgaagaattagttaatgat
aaaaaacggaaagaaattgaagaacgtaaaaagcaagtgatggattctaatttattagat
tgggatacacaaaatgaagataaaattaatgaaatgtgtggtattacaggtgatttactg
aatgctagtttatttacatgtggccgatgcaaatctacaaaaactactagtacacaaaag
caaacacgatcggccgatgaaccgatgacagtttttgttttatgtcttgcttgtaacaat
cgttggaagttttcatag
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