KEGG   Fragilariopsis cylindrus: FRACYDRAFT_243009
Entry
FRACYDRAFT_243009 CDS       T04784                                 
Name
(GenBank) pseudouridine synthase
  KO
K15454  tRNA pseudouridine32 synthase [EC:5.4.99.28]
Organism
fcy  Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:fcy03016]
    FRACYDRAFT_243009
Enzymes [BR:fcy01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     FRACYDRAFT_243009
Transfer RNA biogenesis [BR:fcy03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    FRACYDRAFT_243009
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: OEU13165
JGI: 243009
UniProt: A0A1E7F587
LinkDB
Position
Unknown
AA seq 606 aa
MMELFQFQSQSLKLPPQLGICLATSTSTVASTAASTAASTAALTAASIVASNQQTYNNNN
SIQVLYETISNTNNNDTSNDKSCSRTTIRHISPYYIEQKLLIGNLAKGKKLGDVLGLAGR
PRSSIVKNKTLIDWWPKELVAGRLTVTTSASASALTITSTSTSASASASASRTIFVVVAA
KEDYIIQDGDILFGRYHFHEQSILYDTKPTTVYEDSNFIIVNKPGGIDCLSNPDGNRVLN
SLPGIMLTMKTTNTNTNMDEEKTVIIPPPPIMIMPAHRIDNVVSGLVCCGKTNRATKHLS
QRIYFKQVTKTYLARIQIQKDRFCTRNTDGNNMSCSVGTTSNSSTTSSTTPNSIVCVNNK
KEAEMILNNKLLPIHINVPLGFDKSTGCAITPTSTSSSCNTNKNDEKPTRDKTNNNTNTN
KFKESSTTILKVLSYCNDGSCIIAIRPHTGRKHQLRKHLQFIGLPIVNDRKYNNTNTKNN
KSSTYDAAICSSNNTSAFGLPNPSKEVIELYKKRFVNDCEHCVYVQKLLSTPASSSSSTS
CSSNDHDNKNNNNVMGPCISQPIWLHSWRYKFNTIKNLPCFVAPPPEWATTGYVNEDKWV
NDERLD
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgatggagttgttccagtttcagtctcagtcattaaagttaccaccgcaattgggtatt
tgcctagcaacatcaacatcaacagtagcgtcaacagcagcgtcaacagcagcgtcaaca
gcagcgttaacagcagcgtcaatagtcgcatcaaatcaacaaacatataataataataat
agtatacaagttttgtatgaaactatttctaatacaaataataatgatacaagtaatgat
aaaagttgtagtaggactacaatccgtcatattagtccatattatatagaacaaaaatta
ttaattggtaacttggcaaaaggaaaaaaacttggtgatgtattaggacttgctggacgt
ccacgcagtagtatcgtaaagaataaaacattaattgattggtggccaaaggaacttgta
gctggtcggcttactgttactacaagtgcaagtgcaagtgcacttacaattacaagtaca
agtacaagtgcaagtgcaagtgcaagtgcaagtcgtactatttttgttgttgttgctgcg
aaagaagactacataatacaagatggtgatatattatttggaagatatcattttcatgaa
caatctatattgtatgatacaaaaccaaccactgtatatgaagattcaaattttattatt
gtaaataaaccaggtggtattgattgtttatcaaatccggatggtaatcgtgtattgaat
tcattaccaggaattatgctaacaatgaaaaccacgaacacgaacacgaatatggatgaa
gagaagacagtaataataccaccaccaccaattatgataatgccagcacatcgaattgat
aatgttgtttctggtttagtatgttgtggtaaaacaaatagggctacgaaacacttatca
caacgtatatatttcaaacaagttactaaaacatatcttgcacggatacaaattcagaaa
gatagattttgtacacgtaataccgatggtaataatatgagttgcagtgtaggtacaaca
agtaatagtagtacaacaagtagtacaacaccaaatagtatagtatgtgtaaataataaa
aaggaggcagaaatgattcttaataataaattattaccgattcatataaatgtaccactt
ggatttgataaatcaactggatgtgctattactcctacttctacttcttcttcttgcaat
actaataagaacgacgagaagcctaccagagataagaccaacaacaacaccaacactaat
aaattcaaagaatcttctacaactatattaaaagtattatcatactgcaatgatggatca
tgtataattgctatccgaccacatactggtcgaaaacatcaattacggaaacatttacaa
ttcattggtttacctattgtgaatgataggaaatataataataccaataccaagaataat
aaaagtagtacgtacgatgcagccatttgtagtagtaataacacatccgcatttggttta
cctaatccatcaaaagaggtaatagaattatataaaaaacgatttgtgaatgattgtgaa
cattgtgtttatgttcaaaaattactatcaacaccagcaagtagtagtagtagtactagt
tgcagcagcaacgaccacgacaacaaaaataacaacaatgtgatgggaccgtgtataagt
caacctatatggttacattcatggaggtataaattcaatacaattaagaacttgccatgt
tttgtagctccgcctccggaatgggcgaccacgggatatgtgaatgaggataaatgggtc
aacgatgaacgcttggactaa

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