KEGG   Fragilariopsis cylindrus: FRACYDRAFT_247578
Entry
FRACYDRAFT_247578 CDS       T04784                                 
Name
(GenBank) UFD1-domain-containing protein
  KO
K14016  ubiquitin fusion degradation protein 1
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    FRACYDRAFT_247578
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:fcy03009]
    FRACYDRAFT_247578
Ribosome biogenesis [BR:fcy03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    FRACYDRAFT_247578
SSDB
Motif
Pfam: UFD1_N1 UFD1_N2
Other DBs
NCBI-ProteinID: OEU09970
JGI: 247578
UniProt: A0A1E7EVC1
LinkDB
Position
Unknown
AA seq 369 aa
MMQGGGFFGGGYGGGGGLPAGYGSNRRFEEQYHCYSVAYAGKSHLERGDKILLPPSAFDT
LARLNVDYPMLFRLTSSVDNKTTHSGVLEFTAEEGTCYIPFWMMQNLLIEEGAVITVANI
SLPQGDICEVATSIEVEPQDAACIIETDCNVDFDAPVGYVEPDYSANVSKDQSSGCPSPT
TMSTTSSATNLDTAADDEGDKKPEGTRIVNGEIVRPDEDGQQQQEQSSTAMMAEKTGGTG
VQQNSAIPQVAPKVDYWAVNAGDGSRLDGKSPSVLKDKDGNEIDVRKLRAEAAAKRAEAL
AAAATAGTKKMLTSTGKNLQGEEIPPDADAVEAAAASAIPTSKRKTKVGSKYSRLKKTGI
AFKGSSNKL
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgatgcaaggtggaggttttttcgggggcggttatggtggtggtggtggcttacctgcg
ggttacggtagcaatcgtcgtttcgaagaacaatatcactgttatagtgtagcatatgca
ggcaaatcacatttggagagaggagacaaaatcttattaccaccatctgcatttgatacc
ttagcacgattgaatgtcgattatccgatgttattccgtcttacgtctagtgtagacaac
aaaacgactcatagtggtgttctagaatttactgcagaggaaggaacatgttacatccca
ttttggatgatgcaaaatttattgatcgaagagggagcagttataacagttgccaatatt
agtttaccccaaggcgacatttgtgaagttgcaacctcaatcgaggttgaacctcaagat
gcagcttgtattattgaaacggattgtaacgtagactttgacgctcctgttgggtacgta
gaaccagattacagtgcaaatgttagtaaagatcaatcatcgggatgtccaagtcctaca
acaatgtcgacaacatcctccgcaacaaatctagatacagctgctgacgacgaaggcgat
aaaaaaccagaaggaacgcgtatagtaaacggagagattgtacggccggatgaggacgga
caacaacaacaagaacaatcatcaacggccatgatggcagaaaaaacaggaggtaccggt
gttcaacaaaattctgccattcctcaagtggcaccaaaagtagactattgggccgtcaat
gctggagatggttcacgattggatggaaaatctccatctgtattgaaagataaggatggt
aacgaaattgatgtacgtaaattacgagccgaagctgcagcaaaacgtgccgaagcatta
gcagcagccgccacagcgggtacaaaaaaaatgttaacgtcaaccgggaaaaatcttcag
ggagaagagattcctccggatgccgatgcagttgaagcagctgctgcgtcggctattcct
acgtcaaaacgcaaaacgaaagtaggatccaaatattcacgtctaaagaaaacgggaata
gctttcaagggatcatcaaacaagttgtaa

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