Fragilariopsis cylindrus: FRACYDRAFT_247578
Help
Entry
FRACYDRAFT_247578 CDS
T04784
Name
(GenBank) UFD1-domain-containing protein
KO
K14016
ubiquitin fusion degradation protein 1
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
FRACYDRAFT_247578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcy03009
]
FRACYDRAFT_247578
Ribosome biogenesis [BR:
fcy03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
FRACYDRAFT_247578
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
Motif
Other DBs
NCBI-ProteinID:
OEU09970
JGI:
247578
UniProt:
A0A1E7EVC1
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MMQGGGFFGGGYGGGGGLPAGYGSNRRFEEQYHCYSVAYAGKSHLERGDKILLPPSAFDT
LARLNVDYPMLFRLTSSVDNKTTHSGVLEFTAEEGTCYIPFWMMQNLLIEEGAVITVANI
SLPQGDICEVATSIEVEPQDAACIIETDCNVDFDAPVGYVEPDYSANVSKDQSSGCPSPT
TMSTTSSATNLDTAADDEGDKKPEGTRIVNGEIVRPDEDGQQQQEQSSTAMMAEKTGGTG
VQQNSAIPQVAPKVDYWAVNAGDGSRLDGKSPSVLKDKDGNEIDVRKLRAEAAAKRAEAL
AAAATAGTKKMLTSTGKNLQGEEIPPDADAVEAAAASAIPTSKRKTKVGSKYSRLKKTGI
AFKGSSNKL
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaggtggaggttttttcgggggcggttatggtggtggtggtggcttacctgcg
ggttacggtagcaatcgtcgtttcgaagaacaatatcactgttatagtgtagcatatgca
ggcaaatcacatttggagagaggagacaaaatcttattaccaccatctgcatttgatacc
ttagcacgattgaatgtcgattatccgatgttattccgtcttacgtctagtgtagacaac
aaaacgactcatagtggtgttctagaatttactgcagaggaaggaacatgttacatccca
ttttggatgatgcaaaatttattgatcgaagagggagcagttataacagttgccaatatt
agtttaccccaaggcgacatttgtgaagttgcaacctcaatcgaggttgaacctcaagat
gcagcttgtattattgaaacggattgtaacgtagactttgacgctcctgttgggtacgta
gaaccagattacagtgcaaatgttagtaaagatcaatcatcgggatgtccaagtcctaca
acaatgtcgacaacatcctccgcaacaaatctagatacagctgctgacgacgaaggcgat
aaaaaaccagaaggaacgcgtatagtaaacggagagattgtacggccggatgaggacgga
caacaacaacaagaacaatcatcaacggccatgatggcagaaaaaacaggaggtaccggt
gttcaacaaaattctgccattcctcaagtggcaccaaaagtagactattgggccgtcaat
gctggagatggttcacgattggatggaaaatctccatctgtattgaaagataaggatggt
aacgaaattgatgtacgtaaattacgagccgaagctgcagcaaaacgtgccgaagcatta
gcagcagccgccacagcgggtacaaaaaaaatgttaacgtcaaccgggaaaaatcttcag
ggagaagagattcctccggatgccgatgcagttgaagcagctgctgcgtcggctattcct
acgtcaaaacgcaaaacgaaagtaggatccaaatattcacgtctaaagaaaacgggaata
gctttcaagggatcatcaaacaagttgtaa
DBGET
integrated database retrieval system