Fragilariopsis cylindrus: FRACYDRAFT_248971
Help
Entry
FRACYDRAFT_248971 CDS
T04784
Name
(GenBank) hypothetical protein
Organism
fcy
Fragilariopsis cylindrus
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
YqgF
HHH_9
HHH_7
RVT_1
S1
Motif
Other DBs
NCBI-ProteinID:
OEU09086
JGI:
248971
UniProt:
A0A1E7ETB9
LinkDB
All DBs
Position
Unknown
AA seq
1746 aa
AA seq
DB search
MRLKLLPHFVSSSTTTTTSTRNIILTSISKSELDDIYTPFKPVSKGSIIERIQKEYPELI
QAIDAVWNNSDNNANANVNINKWFQLGGGAPREVIVQVLGTKIASEPQITWLALEELLIE
KEKQSTAKSKSSSSSSATASTKKSISNNNKTSNSNNKYSETYGDFSGHLSYLKDYQVLAI
RRGVKEKALKMTYNIDSDKMEKYLFYCIRKSSSSGSGSGSGSSIVPTSILRYDSGGLIKD
AIHDAWIRLLKRRTTTRLWNEKCIDAQDRACYVFEQNLKRALLQPPYSYKGIPFQPILAL
DPGFAAGIKCSLLDSDGNVIKLDTVQFVGNQARKEKGINKLEQLLKEMKQHMISASTPSS
SSSSSLKNDDDDITITVALGNGHGSMDCRLLIQEASKQCKIPIDIQLVNEAGASVWSVTE
QANEEFPNHPPASIAAISIGRRLQNPLFELVKVPPASLGIGMYQHDLTKKELNEKLDLTC
VDAVATVGVDLNTCSLEILKKVPGLSGSNTLVQKIINARPFKRRIDLISSSSKKQKISGL
GPKTFENCAGFVRVYGGPEVLDTTNVHPESYELARWLLQQEQFSSWLKVLEQDHRGDNNN
NNPDTTDMMQQILQDLPPRDEWDVEWKDTITEAAKIYKVSSERILTVLEQLVDSISNEDP
RLKLLDDSNSNENSVSESPSSALSSSTGSIESCKALPPELSNMDQLSNAINKNKEGSNDA
PVPIRGIIGTVRNVADFGAFIDIGNENNALLHTSKMGTLNPSSLLIGQQIGIDVLSATSS
GNNNRISLGLHGCNYQPSLPRNQVRGSSSSTSSSSGKNKSISNSTKKKATTSKKRSISTK
ATLRRVYRDYKYPITWPTAEEYDDETDYNLEDPKATDQKDASKWREVNCPKEIEFLLRLR
NQRHFGQAESDGTPFTTETMKHKFNWSASTNEAELVLKGEYNDDELSDITRLFLDNMTRV
TEIEDKPKFVTMKEFTGKFKVWRETTSTSPSGRHLGHYKALVATIDRSLKEEERKEFVTF
QEEISKCYIGLINYAIKHRYSLKRWKTIVNMMIYKEHGNVKIHRLRVIHLYEADLSLLWG
VKWREGMHTALKTKSLHQGQYGGLPGRDCTSLTYLEELRFDYSKLTRYPVANFDNDAAAC
YDRILCAIASLAGRKYGIHKDVIFIHAQTLEEAEFKLKSSLKVSDTSYRHCVKFPIHGTG
QGSSNSPTIWCFISSVLFQCHNERASGMLFQSPEGDMIVRFNMVGFVDDSTCITGGNPDD
TLQELLKKMQDDAQLWHDLLWCSGGKLELSKCGYHVIHYDFEDSGIPRMKHNPGESITLQ
NEKGEPISIKSKNIYQTRVNLGHAKAPSDSCNTEFERTLKKAVKIGEAITQCGGTRAESK
MLYKAVWKPAVEYILPQSFLSKKQLQKIEKASLPKIYAKCGYNRNTSRAVLAGPIELGGG
GFTPLYVTAGTGYVTHFLKNWRTPTEDIGKQLRIVYAWTSYQAGVAYPLLEHPERILDYV
NGKVIPGMRAYLDTIDGKIKLNNTYIRSKLRTNDKSIMERVAEMEFTTIQRERINCVRMY
LGVMYLSEICNEDGKSLQKGIEDNKHNKTTYTVSLTRPKQQKPNSYSWKFWKKAIRSFTT
DDKKLELELGSWTNQHSKSGKWESYQSNIDNNIYHHCSNKEDNHQYWEVYERQGYQLTLI
NEMELDEFKIRNGTPIQIKSLANGMKYGEMTAFFCLYAGCQFSVCVTVQLIISNSYTRKL
FEIIKN
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctaaaattattaccacattttgtatcatcatcaactaccacaacgacttcaaca
agaaatattattttaactagtatatcaaaatcagaattagatgatatatatacaccattt
aaaccagtatcaaaaggaagtattattgaaaggattcagaaagaatatccagaattgatt
caggcaattgatgccgtatggaacaacagtgataacaatgcaaatgcgaatgtcaatata
aataaatggtttcaattaggtggtggtgcaccacgtgaagttattgttcaagtattggga
acaaaaattgcctcggaaccacaaataacatggttagctcttgaggaattactaatagaa
aaagaaaaacaatctacagctaaatctaaatcaagtagtagtagtagtgctactgcttct
actaaaaagagcatcagcaacaacaacaagaccagcaatagcaataataaatatagtgaa
acgtatggtgacttttcaggacatttatcctatttaaaagattatcaagtattagctatt
cgacggggtgtgaaagaaaaggcgttaaaaatgacatacaatattgattccgacaagatg
gaaaaatatttattttattgtattcgaaaatcaagtagtagtggcagtggcagtggcagt
ggcagtagtatagtaccaacatctattctgcggtatgattctggtggattaattaaggat
gcaatacatgatgcatggatacgtttattaaaaagacgtaccacaacaagattatggaat
gaaaaatgtattgatgcacaagatcgtgcatgttatgtatttgaacaaaatttaaaacgt
gcattattacagccaccatattcatacaaaggcataccatttcaacctatattagcatta
gatcctggatttgctgctggtattaaatgttcattattagattcggatggtaatgttatt
aaacttgatactgtacaatttgttggaaatcaagcaagaaaggaaaaaggtattaacaag
ttagaacaacttttaaaagaaatgaaacaacacatgatatcggcatcgacaccatcatca
tcgtcgtcgtcgtcgttgaaaaatgacgatgatgatattaccattactgttgcacttggg
aatggccatggtagtatggattgtcgactattaattcaggaggcatcgaaacaatgtaaa
ataccgattgatattcaacttgttaatgaggctggtgccagtgtatggagcgtaacagaa
caggcaaatgaagaatttccaaatcatcctccggcatcgattgcagcaatatcaattgga
cgacgattacaaaatccattatttgaactggtgaaggtcccacctgcatcacttggaatt
ggtatgtaccagcatgatttaactaaaaaggaactcaatgaaaaactggatttaacatgc
gttgatgctgttgcaacggttggtgtcgatttgaatacgtgcagtttagaaatattaaaa
aaggtaccaggattgagtggttctaatacgttagtacaaaaaattataaatgcacgacca
ttcaaaagacgaattgatttaatatcatcatcatcgaagaaacaaaaaattagtggacta
ggccctaaaacatttgaaaattgtgcaggatttgttcgagtttatggtggtcctgaagta
cttgatacaaccaatgttcatccagaatcatatgaattagcacgatggttactacaacaa
gaacaattttcatcctggttgaaagtattagagcaagatcaccgcggtgataataataat
aataatcctgatactactgatatgatgcaacaaatactacaagatcttccacctcgtgat
gaatgggacgtagaatggaaagatacgattactgaagcggcaaagatatacaaagtcagt
tccgaacgcatcctgactgtattggaacagttagtcgattcaatatcgaacgaagatcca
agattgaaacttcttgatgattccaatagtaatgaaaacagcgtatctgaatcaccctca
tcggcgttatcgtcgtcgacgggttcgatcgaatcatgcaaagctcttcctcctgaattg
tcgaacatggatcaactatcgaatgctataaacaagaacaaagaaggttctaacgacgct
cctgtcccaatccgcggtattatcgggactgtacgcaatgttgctgattttggtgcattt
attgatattggaaatgaaaataatgctttactccatacatcaaagatgggtactttaaat
ccatcatctttactaatcggacagcaaattggtattgatgtattaagcgctacgtcatca
ggtaacaataatcgaatctcattgggtttacatggttgtaattatcagccatcattacca
cgtaatcaagtacgaggatcttcctcctccacctcttcctcctctggcaagaataagagt
atctccaacagcactaagaaaaaggctactaccagcaagaagagatcgatatcaaccaag
gctactttgaggagggtatatcgagattacaagtacccaatcacatggccaacagctgaa
gaatacgacgacgagacagattacaaccttgaagacccgaaagcaacagaccagaaagat
gcgagcaaatggagagaagtaaattgcccaaaagagattgaattcctgctgagattgcgc
aaccaacgtcattttggacaggccgaaagtgatggaaccccattcacgacagaaactatg
aaacacaaattcaactggagtgcatcaacgaatgaggctgaattggtcctaaaaggagag
tataacgatgacgaattatcagatataacaagactattcttagataacatgacacgagtg
accgagatagaagacaaaccgaaattcgtaacaatgaaagaatttacaggtaaattcaaa
gtatggagagaaacaacgtcgacatctccaagtggaagacatctgggacattacaaagct
ctggtagcgacaatagatcgatccttaaaagaggaagaaagaaaagaatttgtaacattt
caagaagagatatccaaatgctatataggtttgatcaattatgcgatcaaacatagatat
tctcttaaacgatggaagacaatagtcaatatgatgatatataaagaacatggtaatgtc
aagatacaccggttgcgagtcattcatctttatgaagcagacttaagtctcctctggggc
gtgaaatggagagaaggtatgcatacagcattaaagacaaaatcactacaccaaggacag
tatggagggttacccggacgagattgcacatcactgacatacttagaagaattacgattc
gattattcaaaactgacaagatatccagttgcaaattttgacaacgacgcagcagcatgc
tacgatagaatcctatgtgcaatagcaagtttagcaggaaggaaatacggcattcacaaa
gacgttatattcatccatgcacaaacattagaagaagcagaattcaaactgaaatcatca
ctgaaagtatctgatacatcatatagacactgtgttaaatttcccatacacggaacaggt
caaggatcaagcaattcaccaacaatatggtgttttatatcaagcgtactattccaatgc
cacaatgaaagagcgtccggaatgttatttcagtcaccagaaggtgacatgatagtccga
ttcaatatggttgggtttgttgatgactccacatgtatcaccggaggcaatcccgatgat
acactacaggaattgctgaagaaaatgcaggatgatgcacagctatggcacgatctgttg
tggtgctcaggaggcaaattggaactatcaaaatgcggatatcatgtgattcattacgac
tttgaagacagcggaattccaagaatgaaacataaccctggggaatcaataacactacag
aatgagaaaggcgaaccaatctccatcaaatctaaaaacatataccaaacaagagtgaat
ctaggacatgcaaaagctccaagtgattcttgtaatacagaattcgaacgcacattaaag
aaagcagtaaagatcggggaagcgataacacagtgcggaggcacgagagctgaaagcaaa
atgctgtataaagctgtttggaaaccggcagtcgaatacatattacctcaatcatttcta
tcgaaaaagcaattacaaaagatagagaaagcaagtttgcctaaaatatatgcgaaatgc
gggtacaataggaacacttcaagagcagtactagctggacctatagaacttggaggagga
ggatttacacctctgtacgtgacagccggaacaggttatgtaactcactttctgaaaaat
tggaggacaccaaccgaagatattggaaaacaattacgaatcgtatatgcatggacatca
tatcaagcaggtgttgcataccccttattagaacacccagaaagaatactagattatgta
aacggtaaagtaataccaggaatgagagcatacttggacacaattgatggcaaaataaaa
ttgaataatacctatatcagatctaaactgagaaccaacgacaaaagtatcatggaaaga
gtagccgaaatggaattcaccactattcaaagagaacggatcaattgcgtcagaatgtat
ttgggtgtgatgtatttaagtgaaatttgtaatgaggacggaaagtcgttacagaaaggc
atcgaagacaacaaacacaacaaaacaacatacacagtatcattgactagaccaaaacaa
cagaaaccaaactcctacagctggaaattttggaagaaggcaataagatcattcacaaca
gacgataagaaattagaattggaattaggatcttggaccaaccaacacagcaaatccggc
aagtgggaatcataccagtctaatatagacaataatatatatcatcattgtagcaacaaa
gaagataaccatcagtattgggaagtttatgaacgtcaagggtatcaactcactttaatc
aacgaaatggaactggatgaatttaagatacgaaatggaacaccaatacaaataaaatct
ttagcaaatgggatgaaatatggcgagatgacagcatttttttgtctttatgctggatgc
cagttttctgtatgtgttactgtgcaattaattatctccaatagttatactagaaaatta
tttgaaattattaagaattga
DBGET
integrated database retrieval system
