Fragilariopsis cylindrus: FRACYDRAFT_250437
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Entry
FRACYDRAFT_250437 CDS
T04784
Name
(GenBank) translation elongation factor, EF-1, alpha subunit
KO
K03231
elongation factor 1-alpha
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
FRACYDRAFT_250437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcy03019
]
FRACYDRAFT_250437
03016 Transfer RNA biogenesis [BR:
fcy03016
]
FRACYDRAFT_250437
03012 Translation factors [BR:
fcy03012
]
FRACYDRAFT_250437
04131 Membrane trafficking [BR:
fcy04131
]
FRACYDRAFT_250437
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fcy04147
]
FRACYDRAFT_250437
Messenger RNA biogenesis [BR:
fcy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
FRACYDRAFT_250437
Transfer RNA biogenesis [BR:
fcy03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
FRACYDRAFT_250437
Translation factors [BR:
fcy03012
]
Eukaryotic type
Elongation factors
FRACYDRAFT_250437
Membrane trafficking [BR:
fcy04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
FRACYDRAFT_250437
Exosome [BR:
fcy04147
]
Exosomal proteins
Proteins found in most exosomes
FRACYDRAFT_250437
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Dynamin_N
G-alpha
GTP_EFTU_D4
EF-G_D2
SRPRB
Gtr1_RagA
Alg14
PduV-EutP
Septin
Roc
Motif
Other DBs
NCBI-ProteinID:
OEU07814
JGI:
250437
UniProt:
A0A1E7EPN4
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MSTEKVHINLAVIGHVDSGKSTTTDHLLYKCGGIDQQSIEKFETETKEKNGKNGVLDNLP
TEREHCTSTTTTTTTTTTTTDISHKNFESSEYQFTIIDTPGHRNYIENMITGISQADVAI
LIIDSSQYGRYDDEAGGGGICSSGNEDALLAYTFGVKQMIVVINKMDDDTVDFSEERYKS
IRYDVSSLLKQVGYKPMKIPFIPISGLLGDNLISKSIHMLWYNGPSLLEALDNVNPPKRR
SDKPLRIPIQDVYKINDIQTIATGRVETGVLKPGMKVEFSPSGIINTIETIEINNKTVSQ
ATPGDIVGFTVNNAMNDTDLLLRRGYVTSNSDDQPAQEVSSFEAQVIIMNHPGEITNEYC
PIIDCHTSHVPCVFANIKEKMDRRTGKCIEMNPKSVKTGDAFIVELVPKKPLCVEPFTKF
PTLGRFVVRDLQQIVAVGVVKSVAYGKVKECE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacagaaaaagtgcatataaatctggcagttataggtcacgtcgattccggtaaa
agtaccacaactgatcacttactttacaaatgtggcggaattgatcaacaatcgatcgaa
aagttcgaaacggaaactaaagaaaaaaatggaaaaaatggggtactcgacaatcttcca
accgaacgagaacattgtactagtactactactactactactactactactacaacaaca
gatatttcacataaaaactttgaatcgtctgaataccaattcactatcatcgatactcct
ggtcatcgaaattatattgaaaatatgatcactggtatatctcaggctgatgttgctatt
cttattattgattcttcacaatatggcagatacgacgatgaggcgggaggtggtgggatt
tgtagtagtggcaacgaagatgctctccttgcttatacatttggagtgaaacaaatgatc
gtggtaataaataagatggatgatgatactgttgatttttcagaagaacgttataaatca
attaggtatgacgtttcttccttattaaaacaagttggatacaaaccaatgaaaattcct
tttattccaatatcgggtttactaggtgataatttaatatcaaaatcaattcacatgctt
tggtacaatggaccaagtctactagaggcacttgataatgtcaatccacccaaaagacgt
tccgataaaccccttcgtatccccatacaggatgtatataagataaatgatatccaaact
atagctaccggacgtgtcgaaactggtgtgttaaaacctggtatgaaggttgaattttca
ccttccggaatcatcaatacgatcgagaccatcgaaataaataacaagactgtgtcacag
gctacccctggcgacattgttgggtttactgtcaataatgcgatgaatgatacagatctt
cttcttcgtcggggctacgttacatccaactcagatgatcaaccagctcaggaagtttct
agtttcgaggcacaggtgataataatgaaccatccgggggaaataactaacgaatattgt
cctataatagattgccatacatcccacgtaccttgtgtatttgctaacattaaggaaaaa
atggatcgtcggacaggaaaatgtatagaaatgaatccgaaaagtgtcaaaacaggagat
gcatttatcgttgaattggtaccaaagaaaccactctgtgtggaaccatttacgaaattc
ccgactcttggtcgttttgttgttcgagatttacaacaaattgttgctgttggagttgtg
aagtcggttgcatatgggaaagttaaagagtgtgaataa
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