KEGG   Fragilariopsis cylindrus: FRACYDRAFT_250494
Entry
FRACYDRAFT_250494 CDS       T04784                                 
Name
(GenBank) mago nashi
  KO
K12877  protein mago nashi
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy03013  Nucleocytoplasmic transport
fcy03015  mRNA surveillance pathway
fcy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FRACYDRAFT_250494
  09122 Translation
   03013 Nucleocytoplasmic transport
    FRACYDRAFT_250494
   03015 mRNA surveillance pathway
    FRACYDRAFT_250494
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fcy03019]
    FRACYDRAFT_250494
   03041 Spliceosome [BR:fcy03041]
    FRACYDRAFT_250494
Messenger RNA biogenesis [BR:fcy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     FRACYDRAFT_250494
Spliceosome [BR:fcy03041]
 Complex C
  Other components
   EJC/TREX
    FRACYDRAFT_250494
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-ProteinID: OEU07869
JGI: 250494
UniProt: A0A1E7EPI7
LinkDB
Position
Unknown
AA seq 154 aa
MANVAYYNDEEFYLRVYMGHKSRRFGHEFMEFEVCPSGKLRYANNSNYKDDTIIRREVCL
GPAVVSELKRIIRMSEITQVDDERWEEPPSARRWELEIKIGNEHICFNCAEIMSLNDIKD
SPDPNGLTVLYYLTQDLKCFIMSLINLHFKKKPI
NT seq 465 nt   +upstreamnt  +downstreamnt
atggcgaatgttgcttattacaatgatgaggaattctatcttcgagtatacatgggtcac
aagtcacggcggtttggtcacgaatttatggaatttgaggtctgcccatcggggaaactt
cgatacgctaacaatagcaactacaaggatgatacaatcattcgaagagaggtttgtttg
ggacctgctgttgtttctgaattgaaacgaattatccgtatgtcagaaataacgcaagtc
gatgatgagcgatgggaagaaccaccatccgcacgacgatgggaacttgaaatcaaaata
gggaatgaacatatatgttttaattgtgctgaaattatgtcattaaatgacataaaagat
tcaccagatccgaatgggttaacagttttatactatctaactcaagatcttaagtgtttc
attatgagtctgattaatttacatttcaagaaaaaaccgatttga

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