Fragilariopsis cylindrus: FRACYDRAFT_252263
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Entry
FRACYDRAFT_252263 CDS
T04784
Symbol
mSHMT_1
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy00260
Glycine, serine and threonine metabolism
fcy00460
Cyanoamino acid metabolism
fcy00630
Glyoxylate and dicarboxylate metabolism
fcy00670
One carbon pool by folate
fcy01100
Metabolic pathways
fcy01110
Biosynthesis of secondary metabolites
fcy01200
Carbon metabolism
fcy01230
Biosynthesis of amino acids
fcy01240
Biosynthesis of cofactors
fcy04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FRACYDRAFT_252263 (mSHMT_1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FRACYDRAFT_252263 (mSHMT_1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FRACYDRAFT_252263 (mSHMT_1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FRACYDRAFT_252263 (mSHMT_1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FRACYDRAFT_252263 (mSHMT_1)
Enzymes [BR:
fcy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FRACYDRAFT_252263 (mSHMT_1)
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GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
OEU07082
JGI:
252263
UniProt:
A0A1E7EMB3
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MFALKSCGLRPTATAVTAARITKSAMRSLSSSSGAYLNRDLSDQDPELLNLIEQEKARQR
NSLVLIASENFTSKAVLQALGSVLSNKYSEGYPGARYYGGNENIDQVELLCQKRALEAFQ
LDPEEWGVNVQSLSGSPANFQVYTALLQTHERILSLDLPHGGHLSHGFQTPTKKISAVSR
YFESMPYQLDPSTGTIDYDQMEKSAELFRPKLIVAGASAYARLIDYERIRNIADSVGAYV
LADMAHISGLVSAKVIPSCFPYADVVTTTTHKSLRGPRGAMIFFRKGQKGVDKKGNPIMY
DLEEKINFAVFPGLQGGPHNHTIGALATCLKQANTPEFVEYQKQVLKNCSRLSDELIKRG
YHLVSGGTDNHLVLVDLKTSRKIDGARVERVLEMACIATNKNTIPGDKSALNPGGIRMGT
PALTSRGLTEDDFTKVAEYFDRAVAIAVDLKENTEEGKKLKGFRKMCTVGPSVHPDLVQL
RKEVSEFACEFPTVGFDESEMAYEGEYNVDFVA
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcactcaaatcttgtggattacgtccgacagcaacagcggtcaccgccgctcga
attacgaagagtgccatgagatcactttcctcatcttctggagcatatttaaatcgtgat
cttagtgatcaagatcctgaacttcttaatttaattgaacaagaaaaggcacgacaacgc
aattcattagtgttaatcgcatcggaaaactttaccagtaaggctgtattacaggcatta
gggtccgtcctttctaacaagtacagtgagggatatcctggtgcacgttattacggagga
aatgaaaatattgatcaagtagaattgttatgtcaaaagcgtgctcttgaggcatttcag
ttagacccagaggaatggggtgttaacgtccaatccttatcaggatcacctgctaacttc
caggtatacacagctcttttgcagacacatgaacgtatcttatctttagatttacctcat
ggaggtcatctttcgcatggatttcaaactcccacgaaaaagatttctgctgtctctcga
tactttgaatctatgccgtaccaactcgatccgtcgacaggaacaatcgattatgatcag
atggaaaaaagtgctgaactatttcgtcctaaattgattgtagctggtgcatctgcgtat
gcacgtttgattgattatgaacgtatccggaacattgccgatagtgtaggtgcatatgta
ttagcagatatggcacatatttctggtcttgtttctgctaaggttattccgtcctgtttc
ccatatgccgatgttgtaacgaccaccacacataaatctcttcgtggtcctcgtggtgca
atgatcttcttccggaaaggacaaaagggtgttgacaagaaggggaatcctatcatgtat
gatttagaagaaaagattaactttgcagtatttcctggtctacagggtggtcctcacaac
catacgatcggtgctcttgcaacatgcttaaaacaggcgaatacacctgaatttgtggaa
tatcaaaagcaggtccttaaaaattgttctcgtctctctgatgaattaatcaagagaggg
tatcacttggtcagtggtggaactgataaccatcttgttttggtcgatttgaagacgtcc
cgaaagatcgatggagcacgcgtcgaacgggtattggagatggcatgtatcgctactaac
aaaaataccatcccgggtgataaatctgctttgaatcctggtgggatccgaatgggaaca
ccagcattgacctcacgaggacttacagaagatgactttacgaaggttgccgaatacttt
gatcgggctgtagcaattgcagtagatttaaaggagaatacagaagaaggtaaaaaatta
aagggatttagaaaaatgtgtaccgttggaccatctgtccatcccgatttggtgcaacta
cgaaaggaggtatcggaatttgcctgtgaatttccaacagttggattcgatgaaagtgaa
atggcatatgaaggagaatacaacgttgactttgttgcataa
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