Fragilariopsis cylindrus: FRACYDRAFT_253011
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Entry
FRACYDRAFT_253011 CDS
T04784
Name
(GenBank) hypothetical protein
KO
K08740
DNA mismatch repair protein MSH4
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fcy03036
]
FRACYDRAFT_253011
Chromosome and associated proteins [BR:
fcy03036
]
Eukaryotic type
Meiosis-specific proteins
Others
FRACYDRAFT_253011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_III
DDHD
Motif
Other DBs
NCBI-ProteinID:
OEU06805
JGI:
253011
UniProt:
A0A1E7ELQ1
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MDSHRSVTSNYASKRRRRSSSSSGNNSTRSNPTKSGFGGSYSSSRSISSAASRRGGGGGS
VNSNGNNNNNNNNNGRDRLRRRHNLGIANSNSNSSTSNNRRNNNNNSNDTSSTTQHSLSP
YPTSHIVCAIGENLARETCVVSLDVSAPFLLNVTKQSNGQSYSETISYLSVLCPDEVLMN
EGRYHSPLARKVLQHFDLQRGAQHGGEDGSTAAATSKTATAVGSNSDAAPCDEVTVVKFI
SRSYFDQTKGADLLRRLARQDTYDSTLVEEYILLSSSHAVLHYTQLTLGAVSFTKHCLDV
RVNTGGHNNHRMEIDRSTLLQLELLTNNGAKSSSNRKHSLISTMDCTKTNVGHRLLRTTL
MAPPCRMDTITARLNLVDTFLHDEDLFYATLQQLKNLTSLDNMLTNIVVVPARRQQKQQQ
QQQQQRRQHSTDANTNSSVQAINTTTTTTNNSTATGKNIVGKSNAANARVASKGISALVC
IKSTLASIPVLASILKNHLDRIDAITEEEKQRRKDSRKEEEEEEVKNDDEEGEAVSIATA
KNSLLIGLGVGISSSSSSLSTSSRTNNHQLLRAIIFALSQPELRIVRDAIDEAFTESTTY
TKNANAMKHQECFALKSSDGNGMMDILRKV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggattctcatcgaagcgtaacaagcaattatgcttccaaaagacgacgcagaagtagt
agtagtagtggcaacaatagtacacgtagtaatcctactaaatccggtttcgggggttca
tattcgtcatcacggtccatatcgagtgctgcttctcgtcgtggcggcggtggcggtagt
gtcaacagcaatggcaataataataataataataataataacggtcgcgaccgtcttcgt
cgacgtcacaatcttggtatcgcaaatagcaatagcaacagcagcacgagtaacaaccgt
cgtaataataataacaatagtaatgacacatcatcgacgacacaacattcactgtcaccg
tatccaacatctcatattgtttgtgcaataggagaaaatttagcaagagagacttgcgtt
gtttcattagacgtatcggctccgttcttactcaacgttactaaacaaagtaacggacaa
agttattctgaaacgatctcttatctatcagttctatgtccagatgaagtcttgatgaat
gaaggacgatatcattctccactcgctcgaaaagttttacaacatttcgatttacaacga
ggagcacaacacggcggtgaggatggttctacggcagcagccacatcaaaaacagcaacc
gcggttggttctaattctgatgctgccccttgtgacgaagtaacggttgtcaaatttatt
tctcgatcgtactttgatcaaacaaagggtgcagatctacttcgacgattggcgagacag
gatacatacgattcaacgttggtggaagaatatattttactatcgagttcccacgctgtt
cttcattatacacaacttaccttaggagctgtttcgttcacgaagcattgtttagatgtt
cgtgttaatactggtggtcataacaatcatcggatggaaattgatcgttcaacattactc
caattagaattattgacaaataacggtgcgaaatcatcaagtaaccgtaaacattcattg
atttcgacgatggattgtactaaaactaatgttggacatcgattactacgaacaactctc
atggcaccaccatgtagaatggatactatcacggcacgcttgaatttagtggatacattt
ctacatgacgaagatttgttttacgcaacattgcaacaattgaaaaatctaacgagttta
gacaatatgctaacaaacatagtcgtcgttccagcgaggagacaacaaaagcagcagcag
cagcaacaacaacaacgtcgacaacatagtactgatgctaatactaattcatcggtacaa
gcaatcaataccactactactactaccaataacagtaccgcaactggtaaaaacatcgtt
ggcaagagcaatgcagcaaatgcacgtgttgctagtaaaggtatatctgcactggtctgt
attaagtctacattagcgtccattccagtactcgcatcaatattgaaaaatcatttggat
cgtattgatgcaatcaccgaggaagaaaaacaacgtcgaaaagattcccgcaaagaagaa
gaagaagaagaagtgaagaatgacgatgaagaaggagaagcagtatccatcgccactgcc
aagaatagtttgctgattggtctaggtgtgggtatatcgtcgtcatcgtcatcgttgtca
acttcttctcgcactaacaatcatcaattgcttcgtgcaatcatttttgcgttgagtcaa
ccggagttgcgtatcgttcgggatgcgatcgatgaggctttcaccgaaagcactacgtat
acaaaaaatgctaacgcaatgaaacatcaggaatgttttgccctgaaaagttctgatggg
aacgggatgatggacatccttcgcaaggtatga
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