Fragilariopsis cylindrus: FRACYDRAFT_256517
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Entry
FRACYDRAFT_256517 CDS
T04784
Name
(GenBank) hypothetical protein
KO
K14306
nuclear pore complex protein Nup62
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
FRACYDRAFT_256517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcy03019
]
FRACYDRAFT_256517
Messenger RNA biogenesis [BR:
fcy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
FRACYDRAFT_256517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
Motif
Other DBs
NCBI-ProteinID:
OEU06092
JGI:
256517
UniProt:
A0A1E7EJQ4
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MSGFNFAPPAAGGGNAAAAPAGGGFSFGGGAAAPAPAPAGGGGFSFGNGGGGASAAPPSF
GNVGGAAAAAPPSFGNNVGGGGATAAPPAFGATPAPSFGAAPAAAAAASIPAVSFGAPPA
AASSTTTAAAVAAPSLAFGAPPQTTQAPTPAPPAFGGFGAATTTTTEAPSTNAPAAAAPP
AFNFSQPATTPTPATNEGGGGKKHKAPPGAAPSFSGFGTATAPDTSNANNTTPTTASTTT
TGGFSFGGATATPTTKATTPTTPAGVATPGAPPPVSTPATTTTFNINNNNNSTTTTPAAT
APAAAAATSAPAPPVEPPALEYQTLTVEETLNKFQRQLEEDALAFAEEAKRVCAYDAVLR
DSGRDLGKLNTEAQRLMIEQDQVEDGLNTIGAFQNQLDTILAEVEDQVGTIFQTQNHLNP
ADADLERERSYETAKKIEYQLDDVTNSLRETFDTLNQANASAYGASGDGFSDGGGSSNDI
NSVNDVITVLNRHQDGLAELEAAAQKLELDCLEVSSSLQTSRR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtccggatttaatttcgcgccaccggcagcaggaggaggaaacgcagcagcagctcca
gcaggtggaggttttagcttcggaggaggtgctgcagcaccggcaccagcaccagcgggt
ggcggtggtttctcatttggcaacggtggaggaggagcatcagcagcacctccatcattt
ggaaatgtaggtggagcagcagcagcagctcctccatcatttggtaacaatgtaggcgga
ggaggagcaacagctgctcctccagcatttggcgcaacaccggctccatcatttggcgca
gctccagcagctgctgctgctgcatcgatacccgcggtatcatttggagctcctccagca
gctgcatcatcaacaacaacagcagcagcagtagcagcaccgtccttagcgttcggagct
cctcctcaaactacacaggcacccacgcctgctccaccggcattcggtggttttggggct
gcgacaacgacaacgactgaagctccgtcaacgaatgcacccgcagcagcagcaccaccg
gcatttaatttttcacagccagcaacgactccaactcctgcgacgaacgaaggaggagga
gggaaaaagcataaggcacccccaggagctgctccctcattcagtggctttggtactgcc
actgcacccgatacttcaaatgctaacaacacgactcccactactgcatccaccacaacg
actggtggattttcattcggtggtgccactgcaacaccaacgacaaaggcaactacgccc
actactccagcaggagttgccactccaggtgcacctcctcctgtttcaacgcccgctact
actactaccttcaatattaataataataataattcgacaactaccactcccgccgccacc
gcaccagcagcggcggcggctacatcagcgcctgctcctcctgtagaaccaccagcattg
gaatatcaaactttaacggtggaagagactctcaataaatttcagagacaactcgaagaa
gatgcattagcatttgccgaagaagcgaaacgtgtttgtgcgtacgatgccgtcttacga
gatagtggacgggatcttggtaaactcaatacagaagcacagcgacttatgattgaacag
gatcaagtggaagatggtctgaatacaatcggggcatttcaaaaccaattagatactatc
cttgcggaagtcgaagatcaagttggtacgatctttcaaacacaaaatcatttaaatcct
gccgatgcggacttagaacgagaacgttcctacgaaacagcaaagaaaatcgaataccaa
cttgacgatgttactaattccttacgagaaacattcgataccttaaaccaagcgaatgct
agtgcatacggagcgagtggtgatggttttagtgatggtggtggcagtagcaacgatatt
aattccgtgaatgatgtcattactgttctgaatcgtcatcaagacggattagccgaattg
gaagcagcagcccaaaaattagaattagattgcctcgaagtatcttctagtcttcaaacg
tctagacgctaa
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