Fragilariopsis cylindrus: FRACYDRAFT_258663
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Entry
FRACYDRAFT_258663 CDS
T04784
Name
(GenBank) hypothetical protein
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fcy04131
]
FRACYDRAFT_258663
Membrane trafficking [BR:
fcy04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
FRACYDRAFT_258663
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_C
Motif
Other DBs
NCBI-ProteinID:
OEU05688
JGI:
258663
UniProt:
A0A1E7EIG7
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
LRASFSDGISEDQRKTIPFPSFASPEKQLEQIAAFSENEKFYFQGLTILPTNIKLSVAPA
KALTSEQANLEGKEMASIHVAVRKGDVLVGSSSSGPLGVRVGRKNRTPLAVVRGVFKSIV
VDALLRLSGASLNFHGVFLRNHIATSNQLFTYLAAHYLTSLKHNVPALLGSLSAIGNPLG
LIRGIGDGVSDFVTEPMKGFKRSLKELDPGYAVDGVARGTESLARHTVGGLADSASLLME
TFSKNLAVVTLDRRYAQKRDRRRSLRLKSDSKVTLAGGVESGFMKLVQGFKEGVTGVVRA
PIRGAEKRGLEGFCKGIGKGLLGLLVKPIIGITDAATDVMIGVKSTVEYKEAQRQNLALL
RNQFRPRRPLYGRDKVLKPYNMEDAAASTLMLKTRCAGENYLSHMDMNNRVALLSVKRLI
ILGPRGEEQLALKYKHVDRLEVRSIRQEDGITDGWGIVVVLNTPRRNGSDVEVILCQSEQ
EAINLRVLIQQGVDMVANDSFQET
NT seq
1517 nt
NT seq
+upstream
nt +downstream
nt
gactacgcgctagtttttcagatggaatttctgaggatcaaaggaaaacgattcctttcc
catccttcgcaagtcctgaaaaacaacttgaacagatagctgccttcagcgaaaacgaga
agttttatttccaaggattgacaatcctaccaactaacataaaactttccgtggcaccag
ctaaagcgctcacttccgaacaagccaacctagagggcaaggagatggcatcaatccacg
tagcggtacgcaaaggtgatgttttagtaggaagtagtagcagtggaccacttggtgtcc
gagtggggagaaagaatcgaactcctttggcagtggtacgaggcgtcttcaaatcgatcg
tcgtcgatgctttgctgagacttagcggagcctcgctaaacttccatggcgtttttctga
gaaatcacattgccacaagcaatcagctctttacttatctggcggcacactacctgacat
cgctgaaacataacgtgccagcacttttgggttctcttagtgcgataggaaacccgttag
gcctgatacgaggaatcggagatggagtgagcgattttgtgacagagcctatgaaaggat
tcaaacggagcttgaaagaactagatccgggatatgctgtggatggtgtcgcaagaggaa
ccgagtcactggcccgacatacggttggtggattagcggactctgcctctctattaatgg
aaacattttctaagaacctggccgttgtgacattggatagaagatatgcgcaaaaacgag
accgacgcaggtcgttacgattgaagagtgattcaaaagttactttagcaggtggtgtcg
aaagcggtttcatgaaactcgtgcagggttttaaagaaggcgtaaccggagtcgttcggg
caccgatccgaggggcagaaaagcgtggcctggaaggattctgtaaagggattggtaaag
gtttgctcggattattggtgaaaccaatcattggaattacagatgccgccactgatgtaa
tgattggtgtgaaaagcactgttgaatacaaggaggcgcaacggcaaaacctggcgttgt
tgcgtaaccagtttcgaccccgtcgtcctttatatggacgagacaaggtactaaaaccct
ataacatggaagatgcggcggcttctacattgatgttgaagacccgatgtgcaggtgaaa
attatctgagccatatggacatgaacaatagagttgcgttgttgagtgtgaaaagattga
tcattttgggtccgcgtggagaagagcaacttgccttaaagtacaaacatgtagatcgtc
tcgaggtccgatcgattcgacaagaagatgggatcaccgacggttggggaattgtggtag
ttcttaacactccaagacgaaacggcagcgatgtggaagttattttatgtcagtcggaac
aggaggcaatcaatctacgcgtgttgatccagcaaggtgttgatatggtagcgaacgatt
ctttccaagaaacttga
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