Fragilariopsis cylindrus: FRACYDRAFT_259614
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Entry
FRACYDRAFT_259614 CDS
T04784
Symbol
HDS
Name
(GenBank) (E)-4-hydroxy-3-methylbut-2-enyl diphosphate synthase
KO
K03526
(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:
1.17.7.1
1.17.7.3
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy00900
Terpenoid backbone biosynthesis
fcy01100
Metabolic pathways
fcy01110
Biosynthesis of secondary metabolites
Module
fcy_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
FRACYDRAFT_259614 (HDS)
Enzymes [BR:
fcy01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.1 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)
FRACYDRAFT_259614 (HDS)
1.17.7.3 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin)
FRACYDRAFT_259614 (HDS)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GcpE
Zn_ribbon_9
Motif
Other DBs
NCBI-ProteinID:
OEU20628
JGI:
259614
UniProt:
A0A1E7FR52
LinkDB
All DBs
Position
Unknown
AA seq
763 aa
AA seq
DB search
MVMFTSGALSALLLVAVSEPQGVSGLRPSNFYSRQHAASLSMASTASKEGSSAPPSSDVL
WTPSWKSGERDELFGPIGKYCEDLHEVTRRKTRTVNCGPINFGSDHPIVRQTMATTNTAD
VDATIEQVMRCADEGFDLVRITVQGRREADAAARIREGLFKKGYDIPLCADMHFQPKVAL
MVADCLEKIRINPGNFADGRKDFEEKIYETEEDYVSERQYLLDAMYPLVERCRDLNRCMR
VGTNHGSLSSRVLSFYGDTPRGMVESALEFADICRSQDYHNFVFSMKASNPLVMVQSYRL
LAAEQYRMGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLADGLGDTIRVSLTEDPEFEYD
PCNTLAEMAESRLAINPEAKVRQNAVKSYDDTRDVTSYSRRSGALPEQNEGDVADVRGFL
HRDGSVFLTVSPKMLSKENVQYLYQELGCKTAVGMPFKDIATADSIFMSTIPPSSDTEAR
TALRRLIEVSIGVIVPAAELEKDPLPNAVALFSLEEAISKNGELPEGAIRLAISLNGDED
EDAILKLKELNPIVCLLKPKEGISHLHSARRIFEIFNANDIETSVIHHFTSDTDDSNILA
LQIGTQIGSLLTDGNGDGIMVEQVGDKEHFPVDFVRRTSFSLLQGSRLRNTKTEFVSCPS
CGRTLFDLQETTASITDATGHLPGVTIAVMGCIVNGPGEMADADFGYVGTLPGKVDLYYG
KEVVRKSIPNEEAVDSLVELIKEYDLWVEKEVEEEKEEEVIAA
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggttatgtttacctcaggagctctctcagcgcttcttttagtcgcagtctccgaaccg
caaggtgtcagcggcttaaggccatctaatttctattctcgacaacatgctgcatctttg
tcgatggcaagcacggcatccaaagagggatcatcagctcccccttcctctgatgtttta
tggacaccatcttggaagtctggtgaacgagacgaattatttggacctattggaaaatat
tgcgaagatttgcatgaggttacacgacgtaaaacccggacagtcaactgtggacccatc
aactttggatcggatcatcctattgtccgacaaacaatggccactacaaataccgctgat
gttgacgcaactatcgagcaagttatgagatgtgctgatgagggttttgatttggtacgt
attactgtccaaggtcgacgagaggcagatgcagctgccagaattcgcgagggtttgttc
aaaaagggttatgatattcctctttgtgccgatatgcattttcagccaaaagtagctttg
atggttgctgattgcttagaaaagattcgtatcaatcctggaaactttgccgatggacga
aaagatttcgaagaaaaaatttatgagaccgaagaggattatgtttcggaacgacagtat
ttgttagatgctatgtacccgttagttgaacgttgcagagatttaaatcgttgtatgaga
gtcggaacgaaccatggatccttatcgtcacgagtgctttccttttatggagatacccct
cgtggtatggtcgaatcggctttggaatttgcagatatttgtagaagtcaagactatcac
aatttcgtcttttcgatgaaggctagtaatccgttagtcatggtccaatcttaccgttta
ttggctgcagaacagtaccgaatgggatgggattatcctcttcatcttggagtcaccgag
gctggagaaggtgaagatggtcgcatgaaatctgctattggtatcgggactctcctagcg
gatggtttaggtgacaccattcgagtgtcattgacggaagacccagaatttgaatatgat
ccttgcaatactttagctgaaatggcagagtcgcgattggctattaatccagaagcgaag
gtacggcagaacgctgtgaaatcctacgacgacacccgagatgttacaagctactccaga
cgctcaggagcacttccagaacaaaatgaaggcgatgtagcggatgtgcgtggattcttg
catcgagatgggtccgtatttttgactgtttcacctaaaatgctctcaaaagaaaatgtt
caatacctctatcaggagctaggctgcaagacggcagtgggtatgccatttaaggatatt
gccaccgccgattctatcttcatgtcaaccattcctccgtctagcgatacggaagctaga
acggcccttcgccgtcttatcgaggttagcattggagtcattgtccctgcagcagaatta
gaaaaggacccccttccaaatgctgtcgcactgttcagtctggaagaagccatttccaag
aacggagagcttcctgagggtgccatacgtttagctatttctctcaatggagacgaagat
gaagatgctatactaaaactgaaagaattgaaccccattgtatgcctattgaaaccgaag
gaaggaatcagccacttgcattcagcccgccgcatttttgagattttcaacgcgaacgac
atagaaacatcggtaattcatcactttacatctgacacagatgactcgaacattctagct
ctacagatcggaacgcaaattggttcgctgctaactgatggaaacggagatggcatcatg
gttgaacaagtcggagataaggaacactttccggtcgattttgttcgcagaacatccttc
tctcttttgcaaggatcacgcttgagaaatacaaaaactgaatttgtatcttgtccatcg
tgtggaagaacactctttgatctccaagaaacaactgctagcatcacggatgcaacgggt
catttacctggagtaactattgcagttatggggtgcattgtcaatggacctggtgagatg
gcagatgctgactttggatacgtaggtacccttccaggaaaagtcgatctgtattacgga
aaagaagtggttcgcaagagcatccccaatgaagaagctgtagattcgcttgtggaattg
atcaaggaatacgacttgtgggtagaaaaggaggtagaggaagaaaaagaagaagaagtt
atcgcagcataa
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