Fragilariopsis cylindrus: FRACYDRAFT_259858
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Entry
FRACYDRAFT_259858 CDS
T04784
Name
(GenBank) hypothetical protein
KO
K08490
syntaxin 5
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
FRACYDRAFT_259858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fcy04131
]
FRACYDRAFT_259858
Membrane trafficking [BR:
fcy04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
FRACYDRAFT_259858
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin
COG6_N
SF-assemblin
CRWN_N
Baculo_PEP_C
ATG16
SKA1
Mce4_CUP1
Motif
Other DBs
NCBI-ProteinID:
OEU21300
JGI:
259858
UniProt:
A0A1E7FSZ7
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MAENRTNEFMAMARSMPKDGGLPPQILTSPPTSGRYNNSKNNSGSGGGRNGNSGNDSSYA
KLKDFHNTAGGISRDIASTSSMLAELTQLVRQKSLFQDDSQKVNELVVRIKTAVENLNGR
LDDAGRQIAQQKRTMGKNSQPAQEAINMVSQLQEEFGQAAAGFKTILKQRTDVMKETTDR
KRDIYGTGSSSNEMEDIPVLNLENRPPVYNFSQDDTGIGGGGGGGSMGPTGFPTLDLTSG
MMAAGEPTGSQLPRPHGVGGLRSSSSGGLSTPNYSASTSTYYGRQENNNDQATLLSPFDI
QRMEQESGQDQMMQLIPDQDYLRDRANAMQQVESNIVELGAVYNRLATMVHEHKDMVQRV
EDNVDEANSMINLSLSTLTDTLTNLQSNRGLALKLFSILTLFIISFIIFFA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaatcgaacgaacgaatttatggcaatggcccgtagcatgccaaaggatggt
ggcctacctccacaaatattaacatcaccacccacatctggtcgatacaacaatagcaaa
aacaacagcggtagtggtggtggtcggaatgggaatagtggcaatgactcctcctacgct
aaattaaaagactttcataacacagctggcgggatctctcgagatatcgcttccacgtcc
agtatgttagcggaattgacacaactagtacgacaaaagtcactcttccaagacgatagt
caaaaggtgaatgaattggttgttcggatcaagactgcggtcgaaaacctaaacggtcgt
ttagacgatgctggacgacaaattgcacaacaaaaacgaacgatgggaaaaaattcacaa
ccggcacaggaggcaattaatatggtcagtcagctccaggaagaatttggacaggcagcg
gcaggatttaaaacgattctgaaacaacgaaccgatgttatgaaagaaactacagaccga
aaacgagacatatacggtacaggtagtagtagtaatgaaatggaagacatacccgttttg
aatctcgaaaatcgaccacccgtgtacaatttctctcaggatgatactggtattggtggt
ggtggcggtggtggtagtatgggcccaacaggttttcctactctcgatttaactagcgga
atgatggcagcaggagaacctacaggatcacaattgccacgacctcatggtgtgggaggc
ttgagaagttcctcctcgggtggtctttccactcccaattattccgcatcgacatcaacc
tattacggtcgtcaagaaaataataatgatcaggccacccttttatcaccttttgacatt
caacggatggaacaagaatcgggacaagaccaaatgatgcaattgatacccgatcaagat
tatttacgagatagggctaatgcaatgcaacaagttgaatcgaacatcgtcgagttgggt
gctgtttacaatcgattagcgacgatggtccatgaacacaaggatatggttcaacgtgta
gaagataacgtcgacgaggctaattctatgatcaatcttagtcttagcacgcttactgat
acactgacaaatttacaaagcaatcgtggtctcgctctgaaattattctctattctgaca
ttatttattatttctttcattatattttttgcctaa
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