Fragilariopsis cylindrus: FRACYDRAFT_260828
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Entry
FRACYDRAFT_260828 CDS
T04784
Name
(GenBank) AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
FRACYDRAFT_260828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcy03019
]
FRACYDRAFT_260828
03009 Ribosome biogenesis [BR:
fcy03009
]
FRACYDRAFT_260828
04131 Membrane trafficking [BR:
fcy04131
]
FRACYDRAFT_260828
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fcy04147
]
FRACYDRAFT_260828
Messenger RNA biogenesis [BR:
fcy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
FRACYDRAFT_260828
Ribosome biogenesis [BR:
fcy03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
FRACYDRAFT_260828
Membrane trafficking [BR:
fcy04131
]
SNARE
SNARE associated proteins
Others
FRACYDRAFT_260828
Autophagy
Aggrephagy
Other aggrephagy associated proteins
FRACYDRAFT_260828
Exosome [BR:
fcy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FRACYDRAFT_260828
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_33
AAA_16
AAA_2
AAA_5
AAA_14
AAA_22
TIP49
RNA_helicase
NPHP3_N
nSTAND3
AAA_17
Mg_chelatase
AAA_28
AAA_7
ATPase_2
AAA_18
nSTAND_NTPase5
Parvo_NS1
NB-ARC
ABC_tran
Vps4_C
ResIII
Viral_helicase1
IstB_IS21
DUF815
AAA_24
Zeta_toxin
Rad17
Zot
Molydop_binding
ARM_ECM29_C
Motif
Other DBs
NCBI-ProteinID:
OEU17343
JGI:
260828
UniProt:
A0A1E7FHT8
LinkDB
All DBs
Position
Unknown
AA seq
813 aa
AA seq
DB search
MAPADKDAVMKDAILGAGGKKRSPNRLIVDDATNDDNSVISLSPAKMEQLELFRGDTVLV
KGKKGRDTVCIVLADETCEDCNVRMNKVVRKNLRIRLSDVITVTACGDVPYGKRIHVLPL
DDTIEGVSGNLFEVYLKPYFLEAYRPVKKGDLFLVRSAMHPVEFKVVETDPSPYCIVAPD
TVIHCEGDPVKREDEEKMDDVGYDDVGGCRKQMAQIREMIELPLRHPALFKTLGVKPPRG
VLLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNAPAI
IFIDEIDSIAPKRDKTNGEVERRIVSQMLTLMDGLKQRASVVVIGCTNRPNAIDPALRRF
GRFDREIDIGVPDENGRLEVFRIHTRNMKLDEDVDPEAVAKETHGFVGADIAALCTEAAM
QCIREKMDLIDIEDETIDAEILDSMAVSQEHFRHALAQSNPSSLRETVVEVPNISWEDIG
GLEGVKRDLKELVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLMAKAVANECQANFI
SVKGPELLTMWFGESEANVRDVFEKARQAAPCVLFFDELDSIAQQRGGSSGDGGGAADRV
MNQLLTEMDGVGAKKNVFIIGATNRPDIIDTALMRPGRLDQLIYIPMPDFESRLSILRAT
LRKSPISKDVDLSYMASQTDKFTGADLTEICQSACKMAIREEIERDIERERIKAEAGDDM
EDDDDEEEEDSMPEILSKHFETAVRGARRSVSDRDLAQYASFATTLQQSRATVTGSTGGS
LATFAFPESAEGAAGAEGAAAADDDDDEEDLYS
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgcagacaaagacgcagttatgaaggatgctatcctaggtgctggtggaaag
aaacgtagtcccaatcgtttgattgtcgacgatgccaccaacgacgataattcggtcatt
tcactcagtcctgccaagatggaacagttagaactctttcgaggtgatacagttttagta
aagggaaagaagggacgtgatacggtttgtattgttctagccgatgaaacctgtgaggac
tgtaatgttcgtatgaacaaggtcgttcgtaagaacttacgtattcgtttgagtgatgtt
attaccgtcacagcctgtggagatgtaccatacggaaaacgtatccacgttctaccattg
gatgatactattgagggtgtatctggaaatctattcgaggtttacctgaagccatatttc
ttagaggcgtaccgtcctgtcaaaaagggggatttattcttggtacgatctgctatgcat
cccgtcgaattcaaagtcgtcgaaacggatcctagtccgtactgtatcgtcgctcccgat
actgttattcactgtgaaggtgatcctgtgaagcgtgaagatgaagaaaaaatggacgat
gtcggttacgatgatgttggtggttgtcgtaaacaaatggcacagatccgtgaaatgatc
gaattaccccttcgtcatcctgccctatttaagacgctcggagttaagccaccccgtggt
gtcttattgtacggaccacctggaagtggaaagaccctcatcgctcgtgcggttgcaaat
gaaacaggtgcatttttctttctgattaacggacctgaaatcatgtccaaaatggcaggt
gaatccgaatcgaatttacgtaaggccttcgaggaggcagaaaagaacgcccccgccatt
atcttcatcgacgaaatcgattcaattgcacctaaacgtgacaagaccaatggagaagtc
gaacgtcgtatcgtcagtcaaatgttgacgttgatggacggactcaaacaacgtgcatcc
gtcgttgttatcggatgtaccaatcgtcccaatgccatcgatcctgcattacgtcgtttc
ggtcgtttcgatcgagaaattgatatcggtgttcctgatgagaatggtcgtttagaggtc
ttccgtatccatacccgaaacatgaaactcgatgaggatgttgatccagaagcagttgcc
aaagaaacacatggatttgttggtgccgatatcgccgctctttgtacggaggctgccatg
caatgtatccgtgaaaagatggatttgattgatatcgaagatgaaacaatcgatgcagaa
atcttagacagtatggccgtcagtcaagagcatttccgtcatgcgcttgcccaatctaat
ccatctagtttgagagaaactgtcgtcgaggtaccgaatatctcatgggaagatattggt
ggcttggaaggtgtcaagcgtgatttgaaagaattggtccaatatcccgtcgagcatcct
gaaaagtttgaaaagttcggtatgagtcctagtaagggtgtattgttttacggtcctcct
ggatgtggtaagactcttatggcaaaggctgtagccaatgaatgtcaagccaattttatc
tctgtgaagggacccgaacttttgactatgtggtttggagaatccgaagcgaacgtccgt
gacgtatttgaaaaggctcgacaagccgcaccttgtgtcttgttttttgatgagttagat
tccatcgcccaacaacgtggtggctcatcaggagatggtgggggtgctgctgaccgtgtc
atgaaccagctcttgacagagatggacggtgtgggtgccaagaaaaatgtgtttattatt
ggtgcgacaaatcgacctgatattatcgatacggccttgatgcgtcccggtcgtttggat
caattgatctacatcccaatgcctgactttgagtctcgtctttccattctccgagctact
ttacgtaagtctcctatctcgaaggatgttgatttgtcttacatggcctcccaaacagac
aaatttaccggtgcagatttgacagaaatttgtcagtcggcttgtaaaatggctatccga
gaagagattgaacgcgacattgaacgggaacgaatcaaggcggaagcaggtgacgatatg
gaagatgacgacgacgaagaagaggaagattccatgcctgagatcctttctaagcatttc
gagactgctgttcgtggtgctcgacgctcggtatctgatcgtgatttggcccagtacgca
tcattcgctacgaccttgcaacaatctcgagccactgtcacgggatcaactggtggcagc
ctcgctacctttgcatttccagagtctgcggaaggcgccgctggtgcagaaggtgcagca
gctgcagacgacgacgatgatgaagaagatctttacagctaa
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