Fragilariopsis cylindrus: FRACYDRAFT_261233
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Entry
FRACYDRAFT_261233 CDS
T04784
Name
(GenBank) CRM1_C-domain-containing protein
KO
K14290
exportin-1
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03008
Ribosome biogenesis in eukaryotes
fcy03013
Nucleocytoplasmic transport
fcy03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
FRACYDRAFT_261233
03008 Ribosome biogenesis in eukaryotes
FRACYDRAFT_261233
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
FRACYDRAFT_261233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcy03019
]
FRACYDRAFT_261233
03009 Ribosome biogenesis [BR:
fcy03009
]
FRACYDRAFT_261233
03016 Transfer RNA biogenesis [BR:
fcy03016
]
FRACYDRAFT_261233
03036 Chromosome and associated proteins [BR:
fcy03036
]
FRACYDRAFT_261233
Messenger RNA biogenesis [BR:
fcy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
FRACYDRAFT_261233
Ribosome biogenesis [BR:
fcy03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
FRACYDRAFT_261233
Pre-60S particles
FRACYDRAFT_261233
Transfer RNA biogenesis [BR:
fcy03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
FRACYDRAFT_261233
Chromosome and associated proteins [BR:
fcy03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
FRACYDRAFT_261233
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
Adaptin_N
mTOR_dom
BID
Motif
Other DBs
NCBI-ProteinID:
OEU16414
JGI:
261233
UniProt:
A0A1E7FE55
LinkDB
All DBs
Position
Unknown
AA seq
1095 aa
AA seq
DB search
MATNGSAATSPDLQAIAQQLISGDNFDITLLDQIVAAAYDPVSPHRAQANKALMQLQESP
ELWRMADSIIEQSQNSHSRFFGLQVLDDAIKTRWKIIPADQKEGIKNFVVGKVIKMSSDE
AIMIQERVFIGKLNLTLVEILKQEWPQNWPSFISDLVGSSKTSEILCENNMQILKLLSEE
VFDFSRDQMVTEKVKRMKESLNGEFSQIFQLCQFVLEHSQRPSLLRVTLKTLQRFLTWIP
LGFIFQTNLIQVLLDKFFPEPVFRNNALDCLTEIGTLQDLEPQYDPLFRQLFTTFLLKLR
DVFAPEMDLRQPYRDGSEEDCFFIQKLALFLSGFFKAHLKVLETPESEQALLSGMFYLVR
VSEVQDTEIFRICLEAWHMLAEDLYKADNSQASFYNDGSATSRVLNLNGNSTSSMSRSSR
KFVYSPVLTGVRQVMIANMAKPEEVLIVEDENGDIVRETTKDTDVIAQYKTMRDTLVYLT
HLNCEDTESIMLSKLSDQVRVENNFDWNILNTLCWAIGSISGAMSEDEEKRFLVTVIKDL
LGLCEQKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHESHPGVQDMA
CDTFLKIATKCKRKFVTLQQDEQIPFIGELVESLPSIISDLEPHQVQAFYEAAGCMLNDR
GPNVAIDRQLLQGRLMEMPNRTWEVIMDQAKVSVENLVDPATIKEIIKILKTNNRLCRSV
GGLFTFQLQTFFMDMLNVYRVYSERISGAVAQQGAIATQMSLVRTMRSAKKEVLRLLTTF
IDKSGPPEADALTVAQGFIPPVLDPILGDYKRNIAGARDPEVLVLFTVVIEKLKSNVVDE
VPRIMEAVFECTLEMITKNFEDYPEHRIRFFEFLKAINEHCFPALFNIPPEHQKLVVHAV
VWAMKHKERNIADTGLDILHELLRNVGKTPNVAQAFYQQYLLSLIQDVFAVMTDRFHKSG
FKMHATLLRLMFHLVQQNQVTVPLFDPSTQPPGQTNPAYLREYISNLLVTSFPNLSKTQV
SKFVDGMFNIKMELSPFKIHLRDFLIELKEFNTEDNTALFSEEHERDRVQQEQARMTERS
AVPGMLKPSEIDLDL
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggctacaaatggttctgctgctacttcgcctgatttacaggcgatagcacaacaactt
attagtggcgataactttgatattaccttgttggatcaaattgtggcggcagcgtatgat
ccagtctccccccatcgagcacaggcaaacaaggccttaatgcagctccaggagtcaccg
gaactgtggcgaatggccgatagtattattgaacaatctcaaaattctcattcaagattc
ttcggtcttcaagtactggatgatgctatcaaaacaagatggaagataataccagcagat
caaaaggagggaataaaaaactttgttgttggaaaagttatcaaaatgtcgtcagatgaa
gctattatgattcaagaaagggtctttatcgggaaactcaaccttacattggtagaaatt
ctcaaacaagaatggcctcaaaactggccgtcctttattagtgatcttgttggatcgtcg
aagacatccgaaattctatgcgaaaacaatatgcagattttgaagctactaagtgaagaa
gtttttgacttttcgagggatcaaatggtcacggaaaaggtaaagcgaatgaaagaatca
ctgaacggagaattctcacagatctttcagctgtgtcaatttgttttagagcacagtcaa
agaccgagcttattacgggtaacattgaagacattacaacgattcctaacttggattccc
ctcggatttatcttccaaactaaccttattcaagtcttattggataaatttttcccggag
ccagtttttcgaaataatgctctcgattgtctaacggaaattggcaccctacaggaccta
gagcctcaatacgatcctctatttcgacagctttttactaccttcttattaaaattacga
gatgtatttgctccggaaatggaccttcggcaaccatatagagatggaagtgaggaagat
tgtttttttattcaaaaacttgccttgtttttgagtggtttcttcaaggcacatcttaag
gtgctagaaacacctgagtccgaacaagcactcttatctggaatgttttacttagtacgt
gtctccgaggtgcaggacacggaaattttccgaatctgccttgaagcgtggcacatgtta
gcagaggacctttacaaggctgacaactcccaagcttctttttacaatgatggatctgct
accagtcgcgttttgaatttgaatggtaactcaaccagttcgatgagtagatcatcgcgc
aaatttgtgtatagtcctgttttgactggggtacgacaggtcatgattgcaaacatggcg
aaaccggaggaagtgttgattgtagaagatgagaatggagatattgtacgggaaaccacc
aaagacacggatgtgattgcacagtacaaaactatgcgtgatactcttgtgtacttgacc
catcttaactgtgaggatactgagtctataatgctttcgaaactttcagatcaagtaaga
gtagaaaataacttcgattggaatattctgaatacactctgttgggcaatcggtagcatt
tcgggggctatgtcagaagacgaagagaaaagatttctagtcactgtcataaaggatttg
ttagggctatgtgaacaaaaaagaggaaaggataacaaagcagtggtcgcaagtaacatc
atgtatgtggtgggacagtatcctcgatttttgagagcgcactggaaattcttaaaaact
gtcgtcaataaactgtttgaatttatgcacgaatcgcaccccggtgttcaggatatggcc
tgtgatacctttcttaaaattgcaactaaatgcaaacgtaaatttgttactcttcagcag
gatgaacagattccatttataggcgaattggtcgagtccttgccatctattatcagcgac
ttagaacctcatcaagttcaagctttttacgaagcagctggttgtatgctaaatgacagg
ggtcctaatgttgcaatcgatagacaactacttcaagggaggcttatggaaatgcccaat
cggacatgggaggtcatcatggatcaagctaaagtcagtgtcgaaaatcttgtagatcct
gctaccataaaggaaatcatcaagattttgaagactaacaatcgactttgcaggagtgtt
gggggattattcacttttcagctgcaaacattctttatggatatgctcaatgtgtatcga
gtttattccgaacgaatatctggtgcagtagcccagcagggtgcaattgcaacccaaatg
agtctagtacgaactatgcgaagtgcgaagaaagaagtactacgcttgcttactacattt
attgacaagagtggaccaccggaagctgatgctttgaccgtagcacagggtttcattcca
cctgtcttagatccaatcctaggggactataaacggaacattgcaggagcacgagatccg
gaagtcctcgttcttttcaccgttgttatcgaaaaactgaaatccaacgttgttgatgaa
gtaccaagaatcatggaagctgtgtttgaatgcacattggaaatgataacgaagaacttt
gaagactatcccgagcatcgaatccgcttctttgaattcctcaaagcgatcaacgagcat
tgttttccagcactattcaatattcctccggagcaccaaaagcttgttgtacatgccgtt
gtatgggccatgaagcacaaagaaagaaacatagctgatacgggattggatattttgcac
gaacttttacgaaacgttggcaaaactccaaatgttgcacaggcattctaccagcaatat
cttctttcacttatccaagatgtctttgctgtgatgacggacagatttcacaaatcaggg
tttaaaatgcacgctaccttgctccgattgatgttccatttggtgcaacaaaaccaggtc
actgtaccgctatttgatccatcgacgcaaccaccgggacagactaatcctgcctacttg
cgtgaatacatcagcaacttattagtcactagttttcccaatctatctaagacgcaagtg
tcaaaattcgtcgatggtatgttcaatatcaagatggagttgtccccattcaaaatacac
ctaagagactttcttattgaattaaaggaattcaacactgaagacaataccgcgctcttt
tcagaagaacacgaaagagacagagttcaacaggaacaggctaggatgactgaacgaagt
gctgttccgggtatgctcaagccttccgaaattgatcttgatttgtag
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