Fragilariopsis cylindrus: FRACYDRAFT_261553
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Entry
FRACYDRAFT_261553 CDS
T04784
Symbol
EXO1_1
Name
(GenBank) PIN domain-like protein
KO
K10746
exonuclease 1 [EC:3.1.-.-]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FRACYDRAFT_261553 (EXO1_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcy03032
]
FRACYDRAFT_261553 (EXO1_1)
03400 DNA repair and recombination proteins [BR:
fcy03400
]
FRACYDRAFT_261553 (EXO1_1)
DNA replication proteins [BR:
fcy03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
FRACYDRAFT_261553 (EXO1_1)
DNA repair and recombination proteins [BR:
fcy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
FRACYDRAFT_261553 (EXO1_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_N
XPG_I
XPG_I_2
Motif
Other DBs
NCBI-ProteinID:
OEU15174
JGI:
261553
UniProt:
A0A1E7FAL0
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MGIKGLHKALKFCTVKDNLRSYRNKSIAIDTSSWMHKSVYSITEKLCETTESGRVDEQCV
RVSARYIIARCKELIEGYGIKGIYLVMDGKRCPLKADETQDRENKREQNLIEARRFKRSG
QRHKAEEKYKATIRITKDFTDAVIKDVKNEFNNYSFGFVHVVFSPYEADSMLVKIVLDGL
VDAIITEDSDVLVYSAAAHKSFPILFKLDRGTGACDRISMDWLLSASAENATQAVTSNNT
TLEGILRRLAVRQAKRKGFGVRLFVQSCILAGSDYSINTLDGIGLIGAFKLKIDINEYEE
RLAKSEAVFFYHPVIHTDGTIQTLNPARISSEDNVDDHHFTDHFPFMSRFQGDWSFLGTV
SPASANRGKNISLEPSTSNAIPIWSVDNTQSVQKDARVPVPVPVLSKKRDLLQLLSTQPK
ILNDPYKNRKPKPLNERNMGAEQNHTKAQKKNQDGGILKYLVKPDPRMARRHLSSSTTSN
DSGSKGLKRSRASSSFQISHESDSKKSKKLNSAANFDDKHASSVGARFKIDKFDRYHEGH
TKDTNDFSYSSSSETDYDRRAHNKQNTTCTGSDNNMLNSSFYDLTTSDSRDFDQSSLLST
CPDNLTESERLDTSLIDQTRSRCFESKSDPRRVTLDSSTALDLSIVCRKSNLSQSTHGDN
LNCSEGSSVIERNSWELDECIDDPDEPTPNLPCKSRTKENLKKTNQPIHAFFINQKQEVF
ANQVKRNSRPEPRTSLLTKNSLSQKNKSEQKINTSCSLFFGAGSTKKTNIAFSQLETNAS
HFQSNDEFLWNGSP
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggggataaagggactgcataaagctttaaaattctgcactgtgaaggacaatctgaga
agttatagaaacaagtcaatcgcgattgacacatcttcgtggatgcataaaagtgtttat
tcgattactgaaaagttgtgcgagacaacggaaagcggccgtgttgatgaacaatgcgtt
cgtgtttctgcgagatacatcattgcgaggtgcaaagaattgatcgagggatacgggatc
aaaggaatatatttagtgatggatggtaaacgatgtccgctcaaagcagatgaaactcaa
gatcgtgaaaacaaacgtgaacaaaatttgatagaagcgagaagattcaaacgaagcggt
cagagacataaagcggaagaaaagtataaggcaacaattcgaattacgaaagactttaca
gatgcggtcataaaggatgtcaagaatgagttcaataattatagttttggatttgtgcac
gtggttttttcgccttacgaggctgattcaatgcttgtaaagattgttttggatgggttg
gttgatgcgataataacagaagattcagacgtactggtatacagcgcagctgctcataag
tcatttccaattctattcaaacttgatcgtgggacgggagcctgtgatcgtatttccatg
gattggctgttgtcggccagtgccgaaaacgcgacacaagcagtcacaagcaacaatacc
acattagaaggcattcttcgacgcttagccgtgcgacaagcaaagcgcaagggattcggt
gtccgtcttttcgtacagagttgtattcttgctggctctgattacagtattaacacatta
gatggaattggtttgattggcgcattcaagctaaaaatcgatatcaacgaatacgaggag
cgccttgcaaagagcgaggctgtatttttctatcatccagtaatccatacagatgggact
attcaaacattaaacccagcccgcatatcatcagaagataacgttgacgaccatcatttc
acggatcattttccattcatgtctcgatttcaaggtgattggtcctttctcgggactgtt
agtccggcatcggccaatcgtggtaaaaatatatcactggagccatcgacatcgaatgcg
ataccaatctggtcagtagataatacgcaatctgttcaaaaggatgcacgtgtaccagta
ccagtaccagttttgtcgaaaaaacgagaccttttgcaattattatcgacgcaaccaaaa
atattaaacgatccatacaaaaatcgcaaacccaaaccactgaatgagagaaatatgggc
gcagaacaaaatcatacaaaagctcaaaagaagaaccaagatggcggcattttaaaatat
cttgtgaaacctgacccgagaatggctaggaggcatttatcctcttcaacaacaagtaat
gattcgggatcgaaaggtttgaaacgatctcgtgcatcttctagcttccagatttcgcat
gaatctgattcgaaaaaatcaaaaaaacttaatagtgctgcaaatttcgatgataagcac
gcatccagtgttggtgctagatttaagatagacaaatttgaccgttaccatgaagggcat
accaaggatacaaatgatttttcttattcatcatccagcgaaactgattatgatagacgt
gctcacaacaaacaaaacaccacatgcactggatccgacaacaatatgctgaattcttct
ttttatgacctgactacatctgattcccgtgacttcgatcaatcatccttgttgtctaca
tgtccagacaatcttactgaaagtgagcgactagatacgtcactaattgatcagacgaga
agcagatgcttcgagagtaagtctgatccccgcagagttacactcgattcaagtaccgca
ctcgatttaagcatcgtatgtagaaagtcaaatctgagtcaatctactcatggtgacaat
ctaaactgttcggaaggaagcagcgttatagaaagaaatagctgggaactagacgaatgc
attgatgatccggatgaaccaactcctaacttaccgtgtaaatcaagaacgaaagagaac
ctcaagaagacaaatcaaccaattcatgcattctttatcaatcagaaacaagaagtattt
gccaaccaagttaagagaaattccagaccagaaccgagaacttcattactaactaaaaat
tcactttcacaaaagaataaatctgagcagaaaattaatacaagctgttcactctttttt
ggagcaggcagtaccaagaaaacgaatattgctttctctcaattggaaacaaatgcaagt
cacttccagtcaaacgatgaatttttatggaacggtagtccatga
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integrated database retrieval system