Fragilariopsis cylindrus: FRACYDRAFT_262336
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Entry
FRACYDRAFT_262336 CDS
T04784
Name
(GenBank) cullin-like protein 1
KO
K03347
cullin 1
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy04120
Ubiquitin mediated proteolysis
fcy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
FRACYDRAFT_262336
04120 Ubiquitin mediated proteolysis
FRACYDRAFT_262336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fcy04121
]
FRACYDRAFT_262336
Ubiquitin system [BR:
fcy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
FRACYDRAFT_262336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Sgf11_N
Motif
Other DBs
NCBI-ProteinID:
OEU13639
JGI:
262336
UniProt:
A0A1E7F684
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
MAGNAGNNQRIIPLDEGWDDEIKAKAIDRLEGLLNGDLTGSIFGPKEYVQIYTTCYDMCT
QRSPYNWSRELYQRHGETIERYLTTNVLPALRDKTSQGGTILLSELKHRWQNHQIMNKWL
KKFFTYLDRYYVKHHSLPTLSEAGLRCFRTNVYDEIKGDTTSAIHGLINEEREGKIIDKS
LVKSVVELYESMGMGTLDAYNTDLEEPLLTSTREYYAKKREDWINDSTPDYLIKAEDALD
AERKRVEDYLHTSSEAKILKVVEEEILERVEMVLLEKEGSGCRALLQNDKSEDLQRMYRL
FGRLENGLNPMANILQNFITSMGEDIINRRKARLDSGEKDKNDDPKFVKSIMALHEKYLG
VVKDDFGGNSLFQKGLKDAFVEIVNKNVGQFTNAELMSTFCDRILKSGGEKLSEKEVDAN
LEKIVQLFSYLTDKDMFAEIYRNQLAKRLLSQRSTSNDAEKSMIAKLKMQCGTQFTSKME
GMLNDLAVGAGQRSEFGNQLRTVDTKLDFSVQVLTTGFWPTYKSPAIALTPQMSKCMDIF
KDWHDQKHQKRKLGWVFSQGNASVRGIFGKKSYDLQVATLQAVALDAMNGGATMTFTELA
TKLNVEENILKPLMHSLSCGKYKVIKKTPASNKINTTDSFTANEKFSSNMRKIRIPMASL
DGQLNTKRVEEDRTIAIEAAIVRIMKARKTLQHQQLLSEVLAQLNFFSPNPRLVKKRIEA
LIEREYLERSADNTQVYNYLA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaatgcgggcaataaccaaagaatcattcctcttgatgagggatgggatgat
gaaattaaagctaaggccatcgatagactggaaggcttattgaacggcgaccttacgggt
agtatttttggacccaaggaatacgttcagatctacacaacatgttacgacatgtgcaca
caacgttctccgtacaattggtctcgtgagctataccaacgacatggcgaaacgatcgaa
cgataccttactaccaacgttcttcccgcattacgtgataaaacaagtcagggcggaaca
attcttttatcggaactcaaacaccgttggcaaaatcatcaaattatgaataaatggtta
aagaagttctttacctacctcgatcggtactacgtcaaacatcatagtttacctacttta
agtgaagcgggattacgatgttttcgaactaatgtctacgacgaaataaagggcgatacg
acctcggcaatacatggacttatcaacgaagaacgtgaaggaaagatcatcgataaaagt
ttagtgaagagtgttgttgaactttacgagagtatgggaatgggtaccctcgatgcatac
aataccgatctagaagaaccactacttacttctacgcgagaatactatgccaaaaagcgt
gaagattggatcaacgattctactccagattatcttatcaaggctgaagatgcattagac
gcagagcggaagcgtgtcgaggattacctccatacgtcctcggaagccaagattttgaag
gtagtcgaggaagaaattttagaacgtgtcgaaatggttctgttagaaaaggaaggatct
ggatgccgggccctattgcagaacgacaagtctgaagatcttcaacgtatgtaccgtctt
tttggtagactcgagaacggccttaatcctatggctaatatattacagaactttattaca
tcgatgggtgaagatataatcaatcgtcgcaaagcccgtctggacagtggagagaaggac
aagaatgacgatccaaaattcgttaagtcgattatggcacttcatgaaaaatacctaggt
gttgtaaaggatgactttggtgggaactcgctctttcaaaagggattgaaggatgcattc
gtcgagatcgtcaacaaaaatgtcggtcagttcacaaacgcagaattgatgtcgacgttc
tgcgacagaatcctcaaaagtggtggtgaaaaacttagtgaaaaggaagttgatgccaat
ttagaaaaaatcgttcaactcttttcgtacttgacggacaaggatatgttcgctgaaatc
taccgtaatcaactcgcaaagcgactactcagtcaacgatccacgagtaatgatgcggaa
aaatcgatgattgccaaactcaagatgcagtgtggaacgcaatttacatccaagatggaa
ggtatgcttaatgatctcgctgttggtgctggacaacgatcagaattcggaaatcaactg
cgcactgttgatacgaaacttgattttagtgtacaagtattaacgacgggattctggcct
acttataagagtcccgcaattgctcttacaccacaaatgtccaaatgtatggacatcttc
aaggattggcacgatcaaaagcatcaaaagagaaaattgggttgggtattttctcaaggg
aatgcatcggttcgtgggatttttggaaagaagtcgtacgaccttcaggtcgctacactt
caggcggtggcgttggatgctatgaatggtggtgcaactatgacgttcacagaattggca
acaaagcttaatgtggaagaaaatattttgaagcctttgatgcattctctttcttgtgga
aagtataaggtgatcaaaaagacacctgccagtaacaagatcaacactacggattctttc
accgccaacgagaaattctctagcaatatgcgtaaaattcgtatcccgatggcctcgttg
gatggacaattgaatacgaagcgcgttgaggaggatcgaacgattgcgattgaggctgcc
attgttcggatcatgaaagcacgtaaaactcttcagcatcaacaacttttgtcagaagtt
cttgctcaattgaactttttcagtcccaaccctcgtcttgtgaaaaaacgtatcgaggct
ttgattgaacgggaatacctcgaacgaagcgccgacaacactcaagtatataactatctt
gcataa
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