Fragilariopsis cylindrus: FRACYDRAFT_267058
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Entry
FRACYDRAFT_267058 CDS
T04784
Name
(GenBank) P-loop containing nucleoside triphosphate hydrolase protein
KO
K03257
translation initiation factor 4A
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcy03019
]
FRACYDRAFT_267058
03012 Translation factors [BR:
fcy03012
]
FRACYDRAFT_267058
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fcy04147
]
FRACYDRAFT_267058
Messenger RNA biogenesis [BR:
fcy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
FRACYDRAFT_267058
mRNA cycle factors
Stress granule specific factors
FRACYDRAFT_267058
Translation factors [BR:
fcy03012
]
Eukaryotic type
Initiation factors
eIF-4
FRACYDRAFT_267058
Exosome [BR:
fcy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FRACYDRAFT_267058
Exosomal proteins of bladder cancer cells
FRACYDRAFT_267058
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
Motif
Other DBs
NCBI-ProteinID:
OEU21820
JGI:
267058
UniProt:
A0A1E7FUI7
LinkDB
All DBs
Position
Unknown
AA seq
416 aa
AA seq
DB search
MAEEASDPPPNDTPAADGEEATDAAPGGLTDADISSNWDEIVETFDAMELPEELLRGIYS
YGFEKPSAIQQRAIRPTISGRDLIAQAQSGTGKTATFAIGCLALVDQKVQECQALILAPT
RELACQIQKVVLALGDYMDIKVHACVGGTAVRDDIRTLQAGVHVVVGTPGRVNDMITRRA
LRLESMRQFFLDEADEMLSRGFKEQIYDIFKFLPEQVQVCLFSATMPLDVLEVTDRFMRE
PIRILVKKDELTLEGIKQFYIAVDREEWKLETLCDLYETLTITQAIIYCNTRRKVDWLQE
EMQKRDFTVSCMHGDMDQRERDIIMREFRTGSSRVLITTDLLARGIDVQQVSLVINFDLP
TNRENYIHRIGRSGRFGRKGVAINFLTEGDVRYLRDIEQFYTTEISEMPMDVADLI
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagaagctagtgatccccctcctaatgacacacctgccgccgatggcgaagaa
gccaccgatgctgcacctggtggtttaaccgatgctgatatctcctcgaattgggatgaa
atcgttgaaacttttgatgctatggaattacctgaagaactattacgtggaatttactcg
tatggtttcgaaaaaccatctgctatccaacaacgtgctatcagacctactatttcggga
agagatttaatcgctcaagctcaatccggaacaggaaaaacagcaactttcgcaatcggt
tgtctggcattagttgaccaaaaggttcaagaatgtcaagcattgattttagccccaact
cgtgagttggcatgtcaaattcaaaaggttgttttggcacttggtgattacatggacatt
aaggtccatgcatgtgttggtggtaccgccgtccgtgatgatatccgtactctccaagct
ggtgtccacgttgttgttggtactcctggtcgtgtcaatgatatgatcaccagacgtgct
cttcgccttgaaagtatgagacaattcttcttggatgaagccgatgagatgctttctcgt
ggtttcaaagagcagatttatgatatcttcaagtttcttcccgaacaggtccaagtttgt
ctattttcagccaccatgccattggatgtgttagaagttacggaccgtttcatgcgtgaa
cctatccgtattcttgtcaagaaggatgaattaacccttgaaggtattaagcaattttac
atcgctgtcgaccgagaagaatggaaactcgaaacattgtgcgatttgtacgaaacctta
actatcactcaagctatcatttactgtaatactcgtcgtaaggtcgattggttacaagaa
gagatgcaaaagcgtgactttactgtctcgtgtatgcatggagatatggatcagcgtgag
cgtgatatcattatgcgtgaattccgtaccggttcatctcgtgttttgatcacaactgat
ttactcgcccgtggtatcgatgtccaacaagtttctcttgttatcaacttcgatcttcct
accaaccgcgaaaattacattcatcgtatcggtcgttctggacgtttcggtcgtaagggt
gttgccatcaacttccttacggaaggtgatgttcgttatcttcgtgatatcgaacagttc
tacaccaccgaaattagtgagatgccgatggacgtggccgatcttatctaa
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