Fragilariopsis cylindrus: FRACYDRAFT_267190
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Entry
FRACYDRAFT_267190 CDS
T04784
Name
(GenBank) putative ruvB-like 1 protein
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
FRACYDRAFT_267190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fcy03036
]
FRACYDRAFT_267190
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
fcy03037
]
FRACYDRAFT_267190
Enzymes [BR:
fcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FRACYDRAFT_267190
Chromosome and associated proteins [BR:
fcy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
FRACYDRAFT_267190
Chromatin remodeling factors
SRCAP complex
FRACYDRAFT_267190
INO80 complex
FRACYDRAFT_267190
INO80 complex (yeast)
FRACYDRAFT_267190
SWR1 complex
FRACYDRAFT_267190
ASTRA complex
FRACYDRAFT_267190
Cilium and associated proteins [BR:
fcy03037
]
Motile cilia and associated proteins
Dynein assembly factors
FRACYDRAFT_267190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
Cdc6_lid
Mg_chelatase
AAA_5
AAA_16
AAA_19
AAA_7
AAA_25
bpMoxR
NACHT
ABC_tran
RNA_helicase
DnaB_C
IstB_IS21
nSTAND3
AAA_33
ResIII
NPHP3_N
AAA_28
AAA_17
TsaE
AAA_30
Parvo_NS1
TniB
AAA_11
Zeta_toxin
AAA_18
RecR_HhH
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
OEU22216
JGI:
267190
UniProt:
A0A1E7FVP9
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MVKVETIASANVSVSSSSRVSAHTHITGLGLDENGDAIVPMVGNEQAATMNTSGLVGQTA
AREALGIVSDLVHSQRLAGRALLLVGPPGTGKTALAMGLAQEIGSHQSNKLPFCAMVASQ
VFSREVKKTEVIMEHFRKAIGLRIQERKEVYEGEVTELTVEETEDPLGGYGRTISHVILG
LKTAKGSKTLKLDPTIHDSLSKEGVAVGDVIYIEANSGAVKRVGRSDSFATEFDLEAEEY
VPIPKGDVHKQKTVIQDVTLHDLDMANAHPSSGSSSSGQRDVASLLKSMGKPKKTEITDK
LRGEINKIVEQYINQGIAELVPGVLFVDEVHMLDMECFTYLNRSLESPIAPIVVFATNRG
VTTIRGTEPNNIKAPHGIPIDVLDRMLIVPTLPYSVQEMIAICQIRAKTENLNLSDDAFR
LLGAIGQKTSLRYAIQLLTPANIIAETQGRSQILPDDVSQVDDLFMDGKASAKFLLSNES
VGFMS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggtagaaacgatcgcatcggctaatgtctccgtatcgtcgagtagtcgagta
tccgcccatacacacatcacagggcttggattggatgagaacggagatgccatcgtgccg
atggtaggaaacgaacaagccgccacgatgaatacttccggactggtcggtcaaactgct
gcacgagaagcactgggtattgtttccgaccttgttcattcacaacgtttagcaggacgg
gcattgttactagtgggtccaccgggtaccggtaagaccgcacttgctatgggcctggcg
caagaaatcggttcacatcaatcgaataaactaccattctgcgcaatggtagcatctcaa
gttttttcgcgagaagtgaaaaaaacggaagtcatcatggagcattttcgcaaggctatc
ggattaaggattcaagaacgaaaggaagtatacgagggggaggtgactgaattgactgtc
gaagaaacggaagatccactgggagggtacggccgaaccatttcacatgtcattctaggt
ctgaaaacggcaaagggaagtaaaacgctgaaactcgatccgaccattcacgactctttg
tccaaggaaggtgtagcagtgggtgatgtgatttatatcgaggccaacagtggcgctgtg
aaaagagtgggacgatcggattccttcgcgactgaatttgatctggaagctgaagaatac
gttcccattccaaaaggcgatgtccacaaacaaaagactgtaattcaggacgtcacattg
catgatttggatatggcgaacgctcatccatcgtcgggatctagttcctctggtcaacgg
gacgttgcatcgctattgaagagcatgggcaaaccaaaaaagacggaaattaccgacaaa
ctacggggagaaattaacaaaatcgttgaacaatatatcaatcaggggatcgccgagctt
gttccgggtgttctattcgttgatgaagttcacatgctcgatatggaatgttttacgtat
ctaaatcgatcgttagaatcaccgatcgcccccattgttgtttttgctacaaatcgtggt
gttacaacgataagagggacggaaccgaacaatatcaaggctccgcacggaatacccatt
gatgttttggatcgtatgttgatcgtccccaccctaccctattcagttcaagagatgata
gctatttgccaaattcgtgctaagactgaaaatctaaatttaagtgatgacgcatttcgc
ctgctgggagcgatcggccaaaaaactagtttaagatatgcaattcaacttttaacaccg
gccaacatcattgccgaaactcaaggacgtagtcaaatattgccagatgatgtttctcaa
gtggatgacttatttatggatggcaaggctagcgctaaattcttactatccaacgaaagt
gtcggattcatgagctag
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