Fragilariopsis cylindrus: FRACYDRAFT_267685
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Entry
FRACYDRAFT_267685 CDS
T04784
Name
(GenBank) insert subdomain of RNA polymerase alpha subunit
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03020
RNA polymerase
fcy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FRACYDRAFT_267685
09124 Replication and repair
03420 Nucleotide excision repair
FRACYDRAFT_267685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fcy03021
]
FRACYDRAFT_267685
03400 DNA repair and recombination proteins [BR:
fcy03400
]
FRACYDRAFT_267685
Transcription machinery [BR:
fcy03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
FRACYDRAFT_267685
DNA repair and recombination proteins [BR:
fcy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
FRACYDRAFT_267685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-ProteinID:
OEU20572
JGI:
267685
UniProt:
A0A1E7FQX5
LinkDB
All DBs
Position
Unknown
AA seq
324 aa
AA seq
DB search
MPHQRFPKVQILQMAPHEMRFILSETDTSVANTLRRIMIAEVPTLAIDLVEFHENSSVLN
DEYIAHRLGLIPIRYQPVDSLKGGDCNGAFLPHRECVCYERCPRCSVEFELDVTFDDANT
FRSEEELMAPLTITSKDLKSNNDTVAPAHFLSQDEQDESQDAGVAIVKIGPGQRLKLKAI
ARMGIAKEHSKWCPVAIATYRFWPNITINEEQIATLSMEQKQEIIDVCPDRILEIDNVTG
SIKAHDDAWDMCTYTEDLQEFQQTMKKRKEDDDFVTVEASEDRFIFTVESTGVMDAEEIV
MSGLRVLKDRLNFLAQEVENLKDM
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatcaacgcttcccaaaagtccaaatccttcagatggctcctcatgaaatgcgt
ttcattttgagtgaaaccgacacgtcggtagccaacacattgagacggatcatgatcgca
gaagtacctaccttagcgattgatctagtggaatttcacgagaattcatccgtactgaac
gacgaatatattgcccaccgactgggtctcattcctatacgatatcaacctgtagattcc
ttgaaaggtggagattgcaacggtgcatttttaccccatcgagaatgtgtttgttacgaa
cgttgcccacgttgttcagtagaattcgaactcgatgtgactttcgacgatgctaataca
ttccgatcagaagaagaacttatggcacctttaacaataacttccaaagatttgaagtcc
aacaatgacactgtcgcaccagctcactttttgagtcaagatgaacaggacgaatcacaa
gatgctggtgtagcgattgttaagataggaccgggacagcgtcttaaattaaaggccata
gcaagaatgggaattgctaaggaacattccaaatggtgtccggttgcgattgcgacctat
cggttctggccgaacattaccatcaacgaggaacagatagccacgttgtccatggaacag
aaacaagaaatcattgatgtatgcccggataggatcttagaaattgacaacgtaacgggt
tctattaaggcacatgacgatgcgtgggatatgtgtacttacacagaagatttacaagaa
tttcaacaaactatgaaaaaacgaaaggaagatgacgattttgtaacagttgaagcgtcg
gaagatagatttatctttacggttgaatcaacgggggttatggatgccgaagaaatcgta
atgtctgggctacgggtacttaaggacagactcaatttcttggcacaagaagttgaaaat
cttaaagatatgtaa
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integrated database retrieval system
