Fragilariopsis cylindrus: FRACYDRAFT_267726
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Entry
FRACYDRAFT_267726 CDS
T04784
Name
(GenBank) ubiquitin-domain-containing protein
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03010
Ribosome
fcy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
FRACYDRAFT_267726
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
FRACYDRAFT_267726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
fcy03011
]
FRACYDRAFT_267726
04121 Ubiquitin system [BR:
fcy04121
]
FRACYDRAFT_267726
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fcy04147
]
FRACYDRAFT_267726
Ribosome [BR:
fcy03011
]
Ribosomal proteins
Eukaryotes
Small subunit
FRACYDRAFT_267726
Archaea
FRACYDRAFT_267726
Ubiquitin system [BR:
fcy04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
FRACYDRAFT_267726
Exosome [BR:
fcy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FRACYDRAFT_267726
Exosomal proteins of colorectal cancer cells
FRACYDRAFT_267726
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Dsc3_N
Ubiquitin_5
UBL_UBAC1
Motif
Other DBs
NCBI-ProteinID:
OEU20687
JGI:
267726
UniProt:
A0A1E7FRD6
LinkDB
All DBs
Position
Unknown
AA seq
153 aa
AA seq
DB search
MQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGGKKRKKKVFTRPKKVKRSHKTIPMQSLKYYRVEADGKVTRLRKY
SPVAGIGCFMAQHHDRYYCGKSHTTFLYDDMKE
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatttttgtgaagaccttaacaggtaagaccatcactttagatgtcgaaccttcg
gatactattgacaatgttaagactaagattcaagataaggaaggaattcctccagatcaa
caacgtctaatctttgccggaaagcaattggaagatggacgtacactaagtgattacaac
atccaaaaggaatctactttacatttagtccttcgtctacgaggtgggggtaagaaacgt
aaaaaaaaggttttcactcgccccaagaaggtcaagagatcccataagaccatccctatg
caatccttgaagtattatcgagttgaagctgatggtaaagtcacccgtcttagaaaatat
tcacctgttgcaggaattggctgcttcatggcccaacaccacgatcgttactactgcgga
aaatcccacactacctttttgtatgatgacatgaaggaataa
DBGET
integrated database retrieval system
