Fragilariopsis cylindrus: FRACYDRAFT_268062
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Entry
FRACYDRAFT_268062 CDS
T04784
Name
(GenBank) rotamase-domain-containing protein
KO
K09578
peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:
5.2.1.8
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
FRACYDRAFT_268062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fcy03021
]
FRACYDRAFT_268062
03110 Chaperones and folding catalysts [BR:
fcy03110
]
FRACYDRAFT_268062
Enzymes [BR:
fcy01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
FRACYDRAFT_268062
Transcription machinery [BR:
fcy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
FRACYDRAFT_268062
Chaperones and folding catalysts [BR:
fcy03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Parvulin
FRACYDRAFT_268062
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rotamase
Rotamase_3
USHBP1_PDZ-bd
Motif
Other DBs
NCBI-ProteinID:
OEU19664
JGI:
268062
UniProt:
A0A1E7FNF6
LinkDB
All DBs
Position
Unknown
AA seq
211 aa
AA seq
DB search
MDTGISTWDHPSNIENAEQVADRLLGAVGAVASTRRHVTDDDEEYAAAGEGDNDDQRSSK
RQKTAGTTDSSSSAADDTTMMDSANSSSSSKEGEVRVLHILKKHKGSRRPASWRNPKITA
TWEEAHEELEGLLEILHEEESDFTELRATFEELARTESDCSSAKRGGDLGYFGRKKMQPT
FEKESFNLKIGELTTTIVDTKSGLHILLRIG
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggatacaggaatttctacatgggatcaccctagtaatattgaaaatgctgaacaagtg
gccgatcgtttattgggtgcagttggtgcagttgcatctactagaagacatgttacagac
gacgatgaagagtatgctgctgcaggagaaggagataatgatgatcaaagatcatcgaaa
cgacagaagacagcaggaacaaccgattcttcttcttctgctgctgacgatacgacgatg
atggatagtgctaatagtagtagctcatcgaaagagggtgaagttcgtgttttacatata
ttgaaaaaacataaagggtcacgtcgtccagcatcatggaggaatccaaaaattacagca
acttgggaggaagcacatgaagaattagagggcctactggaaatattacatgaagaagaa
agtgatttcacagaattgcgtgccacatttgaagaattagccagaactgaatcagattgc
tcctccgcaaaacgtggtggtgatttaggttactttggtcgtaaaaaaatgcaaccaaca
tttgaaaaagaatcattcaatttaaaaattggtgaattaacaacaactattgttgataca
aaaagtggtcttcatattttattacgtattggataa
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