Fragilariopsis cylindrus: FRACYDRAFT_268097
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Entry
FRACYDRAFT_268097 CDS
T04784
Name
(GenBank) Snf7-domain-containing protein
KO
K12195
charged multivesicular body protein 6
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03250
Viral life cycle - HIV-1
fcy04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
FRACYDRAFT_268097
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
FRACYDRAFT_268097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fcy04131
]
FRACYDRAFT_268097
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fcy04147
]
FRACYDRAFT_268097
Membrane trafficking [BR:
fcy04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
FRACYDRAFT_268097
Exosome [BR:
fcy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FRACYDRAFT_268097
Exosomal proteins of other body fluids (saliva and urine)
FRACYDRAFT_268097
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Snf7
DUF4946
DUF2840
Motif
Other DBs
NCBI-ProteinID:
OEU19814
JGI:
268097
UniProt:
A0A1E7FNW1
LinkDB
All DBs
Position
Unknown
AA seq
253 aa
AA seq
DB search
MGGAFSNTSSSDNNNATTTTTTKKKPEISATDRATLDLKNARDKLQRYKMKLEQDDIRIV
SRAKKAKVDGNTKAALNLLKVRKMKTREVESVEQQLLNVLQMVQTINSKQNEVQVLQAMK
EGKDTLQKMHEETTVEDVLTLMDDIQEQNELENEINDILQNSPQSLSIADEEAVEAELEA
LMMMGVGLDQQEKNSPITTTTPEKEQQLPIAPDTQPLPQAPSTKLPEATTSAATAATTTI
STTTTQEKVAVAS
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgggtggagctttcagcaatactagtagcagcgacaataataatgcgacaacaacaacg
acgacgaaaaagaaaccagaaatttctgccacagatcgtgctaccttagatttaaagaat
gcacgagataaattacaacgatataaaatgaaattggaacaagatgatattcggatagta
tccagagcaaagaaggcgaaagtcgatggtaataccaaggcagcattaaatttattaaaa
gttcgtaaaatgaaaacacgtgaggtagaatcggtggaacaacaattattaaatgtctta
caaatggtccaaacaattaattcaaaacaaaatgaggtacaggtattgcaagcaatgaag
gaagggaaagatacattacaaaaaatgcatgaggaaacaacagtggaggatgtattaact
ttaatggatgatattcaagaacagaatgaacttgaaaatgaaattaatgatatattacaa
aattcaccacagagtctttctattgcagatgaagaagcagtagaagctgaattagaagca
ctgatgatgatgggtgtgggtttagatcaacaagaaaaaaattctccaataacaactaca
acaccagaaaaggaacaacaacttcctatcgctcccgatactcaaccgttaccacaagca
ccttccacgaaattgcccgaagcaacaacttctgctgctactgctgctactactactatt
tcgacgacaacgacacaagaaaaagtggcagtggcatcataa
DBGET
integrated database retrieval system
