Fragilariopsis cylindrus: FRACYDRAFT_268557
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Entry
FRACYDRAFT_268557 CDS
T04784
Name
(GenBank) V-snare-domain-containing protein
KO
K08495
golgi SNAP receptor complex member 1
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
FRACYDRAFT_268557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fcy04131
]
FRACYDRAFT_268557
Membrane trafficking [BR:
fcy04131
]
SNARE
SNAP-25[N] (Qb)
Gos1 (Gos28)
FRACYDRAFT_268557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-SNARE_C
Sec20
DUF7531
Motif
Other DBs
NCBI-ProteinID:
OEU19107
JGI:
268557
UniProt:
A0A1E7FLU3
LinkDB
All DBs
Position
Unknown
AA seq
240 aa
AA seq
DB search
MDSQFDSLKREATKLERNLEDKVARYQQLVHSIPDSSNNDLLLAESGMGASSSSSSSTSV
EDEATLRHDIQRTLTTLQDLVATQLQPASEKLGTQSSSLLVKRYREIIYDLSGDFEKSRQ
SHTRKIERMKLMEGSNASKPNSLEIDNDGMDSLMRERSHINNSTSAAAAVINQATEIRND
LRNQGMSLGKVQSTMGQIIGNIPGINTLVAKIKSKKSKDDMIIIGVIASCILFTIWYLFG
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggattctcaatttgatagtttaaaacgtgaagcaacaaaattagaacgtaatttagaa
gataaagttgctagatatcaacagcttgttcactctatcccagattcatctaataatgat
ttacttttagcagaatcaggtatgggtgcttcttcttcatcatcgtccagcacatcagta
gaagatgaagcaacattacggcatgatatacaaagaacattaacaacattacaagattta
gtagcaacacaactccaaccggcatccgaaaaactaggtacacaatcctctagtttatta
gttaaacgatatagagaaattatatatgatttatcaggtgattttgaaaaatcaagacaa
tctcatacacgtaaaatagaacgtatgaaattaatggaaggttcgaatgcatccaaacca
aattcattggaaattgataatgatggtatggattctttaatgagagaacgatcacatata
aataattccaccagtgccgctgctgctgttattaatcaagcaaccgaaatacgtaatgat
ttacggaatcagggtatgtcattagggaaagtccaatccactatgggacaaattattggt
aacatcccaggtattaatacattagttgctaaaattaaaagtaaaaagtcaaaagatgat
atgattattattggtgtgattgcctcctgtatcttatttacaatatggtatttatttgga
taa
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