Fragilariopsis cylindrus: FRACYDRAFT_269238
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Entry
FRACYDRAFT_269238 CDS
T04784
Name
(GenBank) WD40 repeat-like protein
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy04145
Phagosome
fcy04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
FRACYDRAFT_269238
09142 Cell motility
04814 Motor proteins
FRACYDRAFT_269238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fcy03036
]
FRACYDRAFT_269238
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
fcy04812
]
FRACYDRAFT_269238
Chromosome and associated proteins [BR:
fcy03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
FRACYDRAFT_269238
Cytoskeleton proteins [BR:
fcy04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
FRACYDRAFT_269238
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
Nbas_N
WD40_RFWD3
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-ProteinID:
OEU15159
JGI:
269238
UniProt:
A0A1E7FAJ0
LinkDB
All DBs
Position
Unknown
AA seq
334 aa
AA seq
DB search
MPKRPEHIFTCGSPITTTRFHPTESTLIIGGCQSGQVVVWDVRAGRMPVQKSILTTTANG
NSKGHTHPICAMEAIEGGAGLVTSATDGRVNFWSLANLRDPVESLQIGDSVSCLAVAPES
GNLICGDDMGSIYTVQSPNASLGGGGGQRSRRQVRKLDCGDECHFGMVTSVATKRLKSST
RAGLSKGFLRGTGELFLSSGVDWTVKLWAPAYTDKAILSLVSHSYDYMSDVQWNPTHPAL
IATASSNGTIGLWNLAHSMEEPITGSDGIVVEPDGGSGRGLNKLKWSPDGRRLLAASADR
VHVLVLSEDVVRQKGDEDSRMMNHLISRGLLDRE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgaccggaacatatctttacctgtggaagtccgatcacgacaactcgcttt
catcctacagaatcaacactcatcattggtgggtgtcagagtggccaagttgttgtttgg
gacgtacgagctgggcgaatgcccgtgcaaaaatccatcctaacaacaacagcgaacgga
aacagcaaagggcacacccatccgatttgcgctatggaagcgattgaaggaggcgcaggc
cttgtgacctcagcaacagacggtcgtgtgaatttctggtctctagctaatcttcgtgat
ccagtcgagtctcttcagattggtgatagcgtatcttgtcttgctgttgctcccgaatct
ggaaatcttatctgtggagatgatatgggttctatatacactgtgcaatctcccaatgct
tcattaggaggaggaggaggccaacgctcaaggcgacaagtacgtaagctcgattgtggc
gacgaatgtcattttggaatggtaacttcagtcgcaacaaaaagattaaagtcgtccacg
agagcaggactatcgaaaggcttccttcgaggtactggtgagttatttttgtcgtccggc
gtagactggacagtaaaattatgggcacccgcgtacacagataaggcaatactaagcctt
gtgagtcactcgtacgattatatgagcgatgtgcaatggaatcctacccatcccgcccta
atagctacagcatctagtaatggaactatcggcctatggaacttagctcattctatggaa
gaaccaattacaggttctgatggtattgttgtggagccagatggtggttctggtcgtggt
ttgaacaaactgaaatggtctccagacggaagaagattgctagcggcgtctgctgatcgc
gttcacgtcttagttttgtcggaggatgttgtcagacaaaaaggagatgaagactctcgt
atgatgaatcacttgatatctcgagggctacttgatcgagagtaa
DBGET
integrated database retrieval system