KEGG   Fragilariopsis cylindrus: FRACYDRAFT_269238
Entry
FRACYDRAFT_269238 CDS       T04784                                 
Name
(GenBank) WD40 repeat-like protein
  KO
K10415  dynein cytoplasmic 1 intermediate chain
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy04145  Phagosome
fcy04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    FRACYDRAFT_269238
  09142 Cell motility
   04814 Motor proteins
    FRACYDRAFT_269238
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:fcy03036]
    FRACYDRAFT_269238
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:fcy04812]
    FRACYDRAFT_269238
Chromosome and associated proteins [BR:fcy03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   SAC (spindle assembly checkpoint) factors
    Motor proteins
     Dynein complex
      FRACYDRAFT_269238
Cytoskeleton proteins [BR:fcy04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dyneins
     FRACYDRAFT_269238
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_IFT140_1st ANAPC4_WD40 Nbas_N WD40_RFWD3 Beta-prop_NUP159_NUP214
Other DBs
NCBI-ProteinID: OEU15159
JGI: 269238
UniProt: A0A1E7FAJ0
LinkDB
Position
Unknown
AA seq 334 aa
MPKRPEHIFTCGSPITTTRFHPTESTLIIGGCQSGQVVVWDVRAGRMPVQKSILTTTANG
NSKGHTHPICAMEAIEGGAGLVTSATDGRVNFWSLANLRDPVESLQIGDSVSCLAVAPES
GNLICGDDMGSIYTVQSPNASLGGGGGQRSRRQVRKLDCGDECHFGMVTSVATKRLKSST
RAGLSKGFLRGTGELFLSSGVDWTVKLWAPAYTDKAILSLVSHSYDYMSDVQWNPTHPAL
IATASSNGTIGLWNLAHSMEEPITGSDGIVVEPDGGSGRGLNKLKWSPDGRRLLAASADR
VHVLVLSEDVVRQKGDEDSRMMNHLISRGLLDRE
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgccaaaacgaccggaacatatctttacctgtggaagtccgatcacgacaactcgcttt
catcctacagaatcaacactcatcattggtgggtgtcagagtggccaagttgttgtttgg
gacgtacgagctgggcgaatgcccgtgcaaaaatccatcctaacaacaacagcgaacgga
aacagcaaagggcacacccatccgatttgcgctatggaagcgattgaaggaggcgcaggc
cttgtgacctcagcaacagacggtcgtgtgaatttctggtctctagctaatcttcgtgat
ccagtcgagtctcttcagattggtgatagcgtatcttgtcttgctgttgctcccgaatct
ggaaatcttatctgtggagatgatatgggttctatatacactgtgcaatctcccaatgct
tcattaggaggaggaggaggccaacgctcaaggcgacaagtacgtaagctcgattgtggc
gacgaatgtcattttggaatggtaacttcagtcgcaacaaaaagattaaagtcgtccacg
agagcaggactatcgaaaggcttccttcgaggtactggtgagttatttttgtcgtccggc
gtagactggacagtaaaattatgggcacccgcgtacacagataaggcaatactaagcctt
gtgagtcactcgtacgattatatgagcgatgtgcaatggaatcctacccatcccgcccta
atagctacagcatctagtaatggaactatcggcctatggaacttagctcattctatggaa
gaaccaattacaggttctgatggtattgttgtggagccagatggtggttctggtcgtggt
ttgaacaaactgaaatggtctccagacggaagaagattgctagcggcgtctgctgatcgc
gttcacgtcttagttttgtcggaggatgttgtcagacaaaaaggagatgaagactctcgt
atgatgaatcacttgatatctcgagggctacttgatcgagagtaa

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