KEGG   Fragilariopsis cylindrus: FRACYDRAFT_269656
Entry
FRACYDRAFT_269656 CDS       T04784                                 
Name
(GenBank) hypothetical protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FRACYDRAFT_269656
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fcy03041]
    FRACYDRAFT_269656
   03400 DNA repair and recombination proteins [BR:fcy03400]
    FRACYDRAFT_269656
Spliceosome [BR:fcy03041]
 Complex B
  Other components
   Prp19 complex
    FRACYDRAFT_269656
 Complex C
   Prp19-CDC5 complex
    FRACYDRAFT_269656
DNA repair and recombination proteins [BR:fcy03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    FRACYDRAFT_269656
SSDB
Motif
Pfam: Myb_Cef
Other DBs
NCBI-ProteinID: OEU14733
JGI: 269656
UniProt: A0A1E7FA61
LinkDB
Position
Unknown
AA seq 504 aa
MEEAATKPATVTSAKNDATSTLLADYSDRPLPTPMRTPLTAPDDPLGGNRESKQQSILRE
ANNLRMLERGQTPLLGGENPLLEERPGEGDGGLDRDVKPIARPTTPGGPLSDGAIARDHF
GLNQRPQSEMRDSFADDAASVGASTFATSTTMAGNTVGISIRELARAERRAAKRARLELE
EALAALPAPQFEYELEAPTGMDVDEDDGKVETVLEDDMADVEAEEMRILQVEADKLYEAR
SSVVKRRDLPRPAGALIHDVDDTDLEETNETVAEGLINKERLTLLKHDAFAFPVEAPTFV
LDSVSGNKKGKKKKKKKRKLDMQADNDSSFSFVPEETPLESISEKALDDAKELIRVEYDR
SIQDERAQSILLDRSNSVKEIFVLNTWIDPKNDSKLLTESLTQEFDTLQEATSTLHKKNE
KTESKLTLLTGGFAKRAQHTSAKISQIYHDLQNTVIEKAIYQKLREQEELGAVARIDRLR
SSISSLKDDEERLKVDLNSLKTPE
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggaggaagctgcaacgaaaccagccaccgtgacatctgccaagaatgacgcaacatcc
acattgttggccgattactctgatcggccactccccactccaatgcggacacctttaacg
gcaccagacgatcctcttggtggcaatcgcgaatccaaacagcagagtattttgcgtgaa
gccaataatttgcgtatgttggaacgaggacagacaccattattaggcggtgagaaccca
ttattagaagaacgaccgggagaaggagacggcggattggatagagatgtaaagccgatt
gcacgacccactacacctggtggaccgttgagtgatggtgcgatcgctcgtgaccatttt
ggtctcaatcaacgtccacaatccgaaatgagagacagtttcgcggacgatgctgcttca
gtaggagcctcaacatttgccacatctacaactatggcgggaaatactgtggggatatcc
attcgagaactggcgcgggccgagcggcgggctgccaaacgagcacggttagaattggaa
gaagccctagcagcactccctgctccacaatttgagtatgaattagaggcacccactggc
atggatgttgatgaagacgatggaaaggttgaaacggtactggaagatgacatggcagac
gttgaggccgaagaaatgcgtatattgcaagtagaagcagataagctatacgaggcgcga
tccagtgtggtaaagcgacgtgatcttccacgtcccgcgggtgctctgattcatgatgtc
gatgatactgatctagaagagacgaacgaaactgtcgccgaggggttaattaacaaggaa
cgcttgactttattaaaacatgatgccttcgcatttcccgtagaagcaccgacatttgtt
ctcgatagcgttagtggcaataaaaagggcaaaaagaagaagaagaaaaagaggaaacta
gacatgcaagctgataatgactcttctttttctttcgttccagaagaaactccgttagaa
tccatttcagaaaaggcattggatgacgctaaggaactcattcgagttgagtacgatagg
tctatacaagatgagagggcacaatcaatccttttagataggagtaattcagtgaaagaa
atttttgtcttgaatacttggatagacccaaaaaatgacagtaagttgttgaccgaaagt
ttgacacaagaattcgatactcttcaagaagctacgtctaccttacataagaagaacgaa
aagactgagtccaagctaactctattgacaggtgggttcgctaaacgtgcccaacacacg
tcggcaaaaatttcacaaatttatcatgacctccagaatactgttatcgaaaaggcgatt
taccaaaagctcagagaacaagaagagctaggtgccgtagctagaattgatcgattacga
tcaagtatatccagtctcaaagacgacgaagagcgattaaaagtcgacttgaattcattg
aaaacgccagaataa

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