Fragilariopsis cylindrus: FRACYDRAFT_269881
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Entry
FRACYDRAFT_269881 CDS
T04784
Name
(GenBank) hypothetical protein
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fcy04121
]
FRACYDRAFT_269881
Enzymes [BR:
fcy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
FRACYDRAFT_269881
Ubiquitin system [BR:
fcy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
FRACYDRAFT_269881
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
Prok-RING_4
RINGv
FANCL_C
zf-RING_Vps41
Motif
Other DBs
NCBI-ProteinID:
OEU13611
JGI:
269881
UniProt:
A0A1E7F5Z1
LinkDB
All DBs
Position
Unknown
AA seq
207 aa
AA seq
DB search
MSVTRLFAPLYIFAVQGNFLKEVYPESPTDILTCQLLVIWVGIQAGILDAQGRFGARFMI
PAQFLPPKYDYSRPIPASLLSSYDDDETATANPSEQLQKEREIPKTEVSLVVPSKRDTSP
RGGGARNRKEGNKLNRTDTMTAETVMAVPKNPSTCVDCVICYNEIDTINRMAYMLSPCDH
IFHKDCLVQWMDVKMECPICRTQLPPI
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaacacgattgtttgcgccgctatatatattcgctgttcaaggtaattttttg
aaggaggtttatcctgaaagccctaccgatatcttgacgtgtcaacttctagtaatatgg
gtaggaattcaggccggcatattggacgcgcagggtcgtttcggtgctcgttttatgatc
ccagcacaatttctaccccccaaatacgactattctcgaccgattcctgcatcgctcctt
tcgtcgtacgatgacgatgaaacggcaacggcgaacccttctgaacaattgcagaaagaa
agagagattccgaagaccgaagtttcgttggtagttcctagcaagagagacacaagccct
cgtggcggcggtgctaggaatcgaaaggaaggaaacaagcttaatcggactgacaccatg
actgctgaaacagtcatggcggtacccaaaaatccctccacatgtgttgactgtgtcata
tgttacaacgagattgacaccattaatcgaatggcttatatgctgtctccctgtgaccat
atatttcataaggattgtttagtgcaatggatggatgtaaagatggaatgtcccatttgc
cggactcaacttcctccaatctaa
DBGET
integrated database retrieval system