KEGG   Fragilariopsis cylindrus: FRACYDRAFT_269944
Entry
FRACYDRAFT_269944 CDS       T04784                                 
Name
(GenBank) elongation factor-like protein
  KO
K03231  elongation factor 1-alpha
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    FRACYDRAFT_269944
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fcy03019]
    FRACYDRAFT_269944
   03016 Transfer RNA biogenesis [BR:fcy03016]
    FRACYDRAFT_269944
   03012 Translation factors [BR:fcy03012]
    FRACYDRAFT_269944
   04131 Membrane trafficking [BR:fcy04131]
    FRACYDRAFT_269944
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:fcy04147]
    FRACYDRAFT_269944
Messenger RNA biogenesis [BR:fcy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     FRACYDRAFT_269944
Transfer RNA biogenesis [BR:fcy03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    FRACYDRAFT_269944
Translation factors [BR:fcy03012]
 Eukaryotic type
  Elongation factors
   FRACYDRAFT_269944
Membrane trafficking [BR:fcy04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    FRACYDRAFT_269944
Exosome [BR:fcy04147]
 Exosomal proteins
  Proteins found in most exosomes
   FRACYDRAFT_269944
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 GTP_EFTU_D4 MMR_HSR1 EF-G_D2 DUF6650
Other DBs
NCBI-ProteinID: OEU13842
JGI: 269944
UniProt: A0A1E7F6M8
LinkDB
Position
Unknown
AA seq 456 aa
MATKEHLSVVVCGHVDAGKSTTCGHLIFKQGGINPREMEKLNELAAEKGKSSFGFAYYLD
TCKEERERGVTIQCNTKEFFTEKYHYTIVDAPGHKDYIKNMITGSATADVGMLLVPAEKG
GFEAAIAKADAKLGVDEGQTRQHARLLYLLGVEQILVGINKMDACNWSEERFLEIKDEFV
KMLQMIGFKPKKVPFIPYSGFHGDNLVDPVDPAKAPWYKGWSANQTPKKQITGFTIVEAL
NNYITPPKREPDAALRLPVSNIYNIKGVGQIICGTVEQGTLRPGDQVGFVPSNLKGKKIF
SIEQHKKVLDSAGPGNSVGLSIKGIAKDEKVNPGDIIYNEKDGELKPVKSFTALVAVQEH
PGVLKPGYCPVVFSRTAKVACKMTKILWKMGKKTGGAKVENPPELSQFENAEIEFEPTAP
LFVEPFAECAALGRFAVMDSNRLKMLGKVSTVTHVA
NT seq 1371 nt   +upstreamnt  +downstreamnt
atggcaaccaaagaacatttatctgtagttgtctgcggacacgttgatgctggaaagtca
accacatgtggtcacttgattttcaagcaaggtggaatcaatcctcgtgagatggaaaag
cttaacgaactcgccgccgaaaagggtaaatcctcattcggtttcgcgtactaccttgat
acctgtaaggaagaacgtgaacgtggtgttaccatccaatgtaacacaaaggaatttttc
accgaaaaataccattacaccatcgtcgatgctcctggtcacaaggattacatcaagaac
atgattaccggatcagccaccgctgatgttggtatgcttttagtccctgccgaaaagggt
ggtttcgaagctgctatcgccaaggctgatgccaagcttggtgttgatgaaggtcaaacc
cgtcaacatgcccgtcttctttacctcctaggtgttgaacaaatccttgttggaatcaac
aagatggacgcctgtaactggtccgaagaacgtttcttggaaatcaaggacgaattcgta
aaaatgcttcaaatgattggtttcaagccaaagaaggtcccattcatcccatactccgga
ttccacggtgataacttggtcgaccctgtcgaccctgccaaggctccttggtacaagggt
tggtctgccaaccaaaccccaaagaagcaaatcaccggtttcaccatcgttgaagctctt
aacaactacatcacaccacctaagcgtgaacctgatgccgctcttcgattacctgtttcc
aacatctacaatattaagggtgttggtcaaattatttgcggaaccgtcgaacaaggaact
ctccgacctggtgaccaagttggattcgtcccatccaaccttaagggaaagaagattttc
tccatcgaacaacacaagaaggtcttggactctgccggacctggtaactctgttggtctt
tccatcaagggtatcgccaaggacgaaaaggtcaaccctggtgacatcatctacaacgag
aaggatggtgaactcaaacctgtcaagtctttcactgcattagttgccgtccaagaacat
cctggtgtcctcaagcctggatactgtcctgttgtcttctcccgtaccgcaaaggtcgcc
tgtaagatgaccaaaatcttgtggaagatgggaaagaagactggaggtgccaaggtcgaa
aacccaccagaactctcacaattcgaaaacgccgaaatcgagttcgaacctaccgctcct
cttttcgtcgaaccattcgctgagtgtgccgcccttggacgtttcgctgttatggattcc
aatcgtcttaagatgcttggaaaggtctccactgttacacacgtagcttag

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