Fragilariopsis cylindrus: FRACYDRAFT_269944
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Entry
FRACYDRAFT_269944 CDS
T04784
Name
(GenBank) elongation factor-like protein
KO
K03231
elongation factor 1-alpha
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
FRACYDRAFT_269944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcy03019
]
FRACYDRAFT_269944
03016 Transfer RNA biogenesis [BR:
fcy03016
]
FRACYDRAFT_269944
03012 Translation factors [BR:
fcy03012
]
FRACYDRAFT_269944
04131 Membrane trafficking [BR:
fcy04131
]
FRACYDRAFT_269944
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fcy04147
]
FRACYDRAFT_269944
Messenger RNA biogenesis [BR:
fcy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
FRACYDRAFT_269944
Transfer RNA biogenesis [BR:
fcy03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
FRACYDRAFT_269944
Translation factors [BR:
fcy03012
]
Eukaryotic type
Elongation factors
FRACYDRAFT_269944
Membrane trafficking [BR:
fcy04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
FRACYDRAFT_269944
Exosome [BR:
fcy04147
]
Exosomal proteins
Proteins found in most exosomes
FRACYDRAFT_269944
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
EF-G_D2
DUF6650
Motif
Other DBs
NCBI-ProteinID:
OEU13842
JGI:
269944
UniProt:
A0A1E7F6M8
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MATKEHLSVVVCGHVDAGKSTTCGHLIFKQGGINPREMEKLNELAAEKGKSSFGFAYYLD
TCKEERERGVTIQCNTKEFFTEKYHYTIVDAPGHKDYIKNMITGSATADVGMLLVPAEKG
GFEAAIAKADAKLGVDEGQTRQHARLLYLLGVEQILVGINKMDACNWSEERFLEIKDEFV
KMLQMIGFKPKKVPFIPYSGFHGDNLVDPVDPAKAPWYKGWSANQTPKKQITGFTIVEAL
NNYITPPKREPDAALRLPVSNIYNIKGVGQIICGTVEQGTLRPGDQVGFVPSNLKGKKIF
SIEQHKKVLDSAGPGNSVGLSIKGIAKDEKVNPGDIIYNEKDGELKPVKSFTALVAVQEH
PGVLKPGYCPVVFSRTAKVACKMTKILWKMGKKTGGAKVENPPELSQFENAEIEFEPTAP
LFVEPFAECAALGRFAVMDSNRLKMLGKVSTVTHVA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaaagaacatttatctgtagttgtctgcggacacgttgatgctggaaagtca
accacatgtggtcacttgattttcaagcaaggtggaatcaatcctcgtgagatggaaaag
cttaacgaactcgccgccgaaaagggtaaatcctcattcggtttcgcgtactaccttgat
acctgtaaggaagaacgtgaacgtggtgttaccatccaatgtaacacaaaggaatttttc
accgaaaaataccattacaccatcgtcgatgctcctggtcacaaggattacatcaagaac
atgattaccggatcagccaccgctgatgttggtatgcttttagtccctgccgaaaagggt
ggtttcgaagctgctatcgccaaggctgatgccaagcttggtgttgatgaaggtcaaacc
cgtcaacatgcccgtcttctttacctcctaggtgttgaacaaatccttgttggaatcaac
aagatggacgcctgtaactggtccgaagaacgtttcttggaaatcaaggacgaattcgta
aaaatgcttcaaatgattggtttcaagccaaagaaggtcccattcatcccatactccgga
ttccacggtgataacttggtcgaccctgtcgaccctgccaaggctccttggtacaagggt
tggtctgccaaccaaaccccaaagaagcaaatcaccggtttcaccatcgttgaagctctt
aacaactacatcacaccacctaagcgtgaacctgatgccgctcttcgattacctgtttcc
aacatctacaatattaagggtgttggtcaaattatttgcggaaccgtcgaacaaggaact
ctccgacctggtgaccaagttggattcgtcccatccaaccttaagggaaagaagattttc
tccatcgaacaacacaagaaggtcttggactctgccggacctggtaactctgttggtctt
tccatcaagggtatcgccaaggacgaaaaggtcaaccctggtgacatcatctacaacgag
aaggatggtgaactcaaacctgtcaagtctttcactgcattagttgccgtccaagaacat
cctggtgtcctcaagcctggatactgtcctgttgtcttctcccgtaccgcaaaggtcgcc
tgtaagatgaccaaaatcttgtggaagatgggaaagaagactggaggtgccaaggtcgaa
aacccaccagaactctcacaattcgaaaacgccgaaatcgagttcgaacctaccgctcct
cttttcgtcgaaccattcgctgagtgtgccgcccttggacgtttcgctgttatggattcc
aatcgtcttaagatgcttggaaaggtctccactgttacacacgtagcttag
DBGET
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