KEGG   Fragilariopsis cylindrus: FRACYDRAFT_271438
Entry
FRACYDRAFT_271438 CDS       T04784                                 
Name
(GenBank) WD-40 repeat-containing protein
  KO
K14298  mRNA export factor
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    FRACYDRAFT_271438
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fcy03019]
    FRACYDRAFT_271438
   03036 Chromosome and associated proteins [BR:fcy03036]
    FRACYDRAFT_271438
Messenger RNA biogenesis [BR:fcy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     FRACYDRAFT_271438
Chromosome and associated proteins [BR:fcy03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    FRACYDRAFT_271438
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WDR55 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 EIF3I Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_IFT80_2nd
Other DBs
NCBI-ProteinID: OEU09256
JGI: 271438
UniProt: A0A1E7ETS9
LinkDB
Position
Unknown
AA seq 361 aa
MASFGTQQPVAAAGQKKSIGPNDCNVPQAGTDGISSLNWSPTANFLISSNWDSGVRVWEA
ACNPQNTNQPVQVQPKAQVNHENSMPVLDTCFSADGSTVFSCGADKAVRMWRLGETPPNN
IPQQIGAHDKPIQSVGFLSKSNLVVSGGWDAKLKFWDTRSPTPVGEFQLPERVYDLDVQG
GLMVVATANRQVIIYDVSGPQPREHSRKESPLKYQSRCVSCFPDQTGFAIGSIEGRVGVQ
YIQKIPNKDHFAFKCHRQDSNVYSVNCLAFQNVYGTFATVGSDGVVTFWDKDNKQRLKAF
PAIGQTIPCAAFNAQGNMFAYASSYNWSKGSQFYSPGSTPNEIYVHYTPEDEIKPKAAKK
K
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggcatcatttggtacacaacaaccagtggcagccgctggtcaaaaaaaatcaattgga
cccaatgattgtaatgtaccacaagctggtacggatggtatatcatccttgaattggtca
cccaccgcaaattttttaatttcctcgaattgggattccggtgtacgagtttgggaagcg
gcctgtaatccacaaaataccaatcaaccagtgcaagtacaacccaaggcacaagtcaac
catgaaaattccatgccggtcttagatacctgtttttcggcggacggatcgacagtcttt
tcctgtggtgccgataaggccgtacggatgtggcgactcggtgaaactcctccgaataat
attccacaacaaattggtgcccacgataagcccatacaaagtgtgggattcttatcaaaa
agtaatcttgttgtgagtgggggatgggatgctaaattaaagttttgggatacacgaagt
ccaactccggtgggagaattccaacttcctgaacgtgtgtacgacctagatgtacagggt
ggtctgatggtcgtcgcaacagcgaatcgacaggtgattatttatgacgttagtggacca
caaccccgtgaacacagtcggaaggaatcaccattgaaataccaatcacgatgtgtgagt
tgctttccagatcagaccgggtttgcgattggtagtatcgagggccgagtgggtgtccaa
tacatacaaaaaatcccaaataaagaccattttgccttcaaatgtcatcggcaagattcc
aatgtatacagtgtcaattgtcttgcctttcaaaacgtatatggaacattcgcaactgtt
ggttcagatggtgttgtgacattttgggataaagataataaacaacgtcttaaagcattc
ccagcgattggacaaactatcccatgtgcagccttcaatgcacaaggtaatatgtttgcc
tatgcgagtagttacaattggagtaaaggttcacagttttattcaccaggatcaactccg
aatgaaatttatgtccattatactcccgaagatgaaatcaaaccaaaggcggctaaaaag
aaataa

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