Fragilariopsis cylindrus: FRACYDRAFT_273802
Help
Entry
FRACYDRAFT_273802 CDS
T04784
Name
(GenBank) chaperonin Cpn60/TCP-1
KO
K09493
T-complex protein 1 subunit alpha
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
fcy03110
]
FRACYDRAFT_273802
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
fcy03037
]
FRACYDRAFT_273802
04147 Exosome [BR:
fcy04147
]
FRACYDRAFT_273802
Chaperones and folding catalysts [BR:
fcy03110
]
Heat shock proteins
HSP60 / Chaperonin
FRACYDRAFT_273802
Cilium and associated proteins [BR:
fcy03037
]
Primary cilia and associated proteins
BBS-CCT complex
FRACYDRAFT_273802
Exosome [BR:
fcy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FRACYDRAFT_273802
Exosomal proteins of colorectal cancer cells
FRACYDRAFT_273802
Exosomal proteins of bladder cancer cells
FRACYDRAFT_273802
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4979
Motif
Other DBs
NCBI-ProteinID:
OEU22229
JGI:
273802
UniProt:
A0A1E7FVQ1
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MSTPNASAGSGLFIQGSRETGEDVRVGNVTAVVALANIMKSSLGPVGLDKMLVDDIGDVT
ITNDGATILEQLEVEHPAARLLVDLARLQDKEVGDGTTSVVLLSAELLKKGLGELVQKQG
LHPTTVLAGYRIALKAAIAYIKEQILMPVSSLDSQHLLEAARTSMSSKIIGKEGDFFAHL
AVDAVQSVAHTKEISSKNGSIKNKTVYPLSAIHILKVHGKSSLESYLMKGGFVLNATRAS
QGMPTFLGNPDDETSEVKIAMIDMNLQRHRMAMGVNIQIKDPKEIERIKQREMDLTKEKI
QKILDTGAKVVLTTKGVDDTCMKYFVEAGVFCARRVPKEDLKRLAKATGGQVVITMADME
GEESFDESSLGKCRAIQETRVGDGELLKIFGCQGSGASTIVLRGANEYMLDEIDRSLHDS
LCVVKRMLESNSLVPGGGAVEAALNVYLQEFALKTIDTREQLAVEAFAEALLVIPKTLAV
NAAQDGAELVSKLRSIHAKSQRPENEDENLKNYGLDLVNGVIRDSLAAGVVEPAISKIKS
LRFATEAAITILRIDDRITVVPNQQ
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaccaaatgcttccgctggtagcggtcttttcatacaaggatctcgagaaaca
ggtgaggatgttcgggtaggaaacgtaaccgctgttgtggctctggccaacatcatgaag
tcgtcactgggaccagttgggttagataagatgttggtggacgacatcggcgacgtgact
attacaaacgatggtgcaactattctggaacaacttgaagtggaacatcccgcagcacga
ttactagtcgatctagcccgacttcaagacaaggaggtcggcgatggaacaacttcggtc
gtattgttgtcggctgaacttttaaagaagggtctaggcgagttggtccaaaaacaggga
ttacatcccactactgttttagccggttatcggatcgcactgaaagcggccattgcttac
attaaggaacaaattttaatgcccgtttcgtcattggattcacaacacttgttggaggca
gcgagaactagcatgtcgtcgaaaattattggtaaggaaggtgattttttcgcacatttg
gccgtcgatgctgtccaatcagtagctcataccaaagaaattagttcgaagaatggaagc
ataaaaaataagaccgtgtatccgttaagtgcgatccacattttgaaagttcacggaaag
tcctccttggaatcctatctgatgaagggaggtttcgttttgaacgctacaagagcctcc
cagggtatgccaacttttttgggaaatcctgatgatgaaacatcggaagtgaaaattgcc
atgattgacatgaacttgcagcgtcaccgtatggcaatgggagttaatattcaaattaag
gacccaaaagaaatcgaacgaatcaaacaaagagaaatggatttaaccaaagaaaagatt
caaaagattttggacactggtgccaaggttgtattaaccaccaagggggtcgacgacacg
tgtatgaaatactttgttgaagcaggagtcttctgtgctcgacgtgttcctaaggaagat
ttgaaacgactagccaaggcgacgggaggacaagtcgttattactatggccgatatggaa
ggagaggaatcctttgatgaatcatcgctgggtaagtgtagggcgattcaagaaactcga
gtgggggatggcgaactccttaagatatttggatgtcaaggttcaggagcatcaactatc
gtcttgaggggtgccaatgaatatatgctggatgagatcgatcgttcgttgcatgactcg
ttgtgtgtcgtcaagcgcatgttggaatcaaattccctagtacccggcggaggagcggta
gaggcagcactcaatgtttacctacaagaatttgccctgaaaacgattgatactagagag
caattggctgtggaagcattcgcggaggctcttttggttattccgaagacgttggccgtc
aatgccgcccaggacggtgccgaattggttagtaaattaagatctatacatgccaaatca
caacgaccagaaaacgaagacgaaaacctaaagaactacggactcgatcttgtcaacggt
gtaattcgagacagcttggcagccggtgtcgttgaaccagcaatctccaagattaagagt
cttcggtttgcaactgaagctgctataaccattcttagaatcgatgatagaattacagtc
gtgccaaatcaacaataa
DBGET
integrated database retrieval system
