Fragilariopsis cylindrus: FRACYDRAFT_273892
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Entry
FRACYDRAFT_273892 CDS
T04784
Name
(GenBank) beta subunit of phenylalanyl-tRNA synthetase
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FRACYDRAFT_273892
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fcy01007
]
FRACYDRAFT_273892
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fcy03016
]
FRACYDRAFT_273892
Enzymes [BR:
fcy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
FRACYDRAFT_273892
Amino acid related enzymes [BR:
fcy01007
]
Aminoacyl-tRNA synthetase
Class II (U)
FRACYDRAFT_273892
Transfer RNA biogenesis [BR:
fcy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FRACYDRAFT_273892
Prokaryotic type
FRACYDRAFT_273892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
OEU22465
JGI:
273892
UniProt:
A0A1E7FWF8
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MPTVALEKDQLFTHLGRTYTDDEFDELCFEFGVELDEITSEREEAEKSSTVKLSKQQIAE
LSENVIYKIDIPANRYDLLCVEGLCRGLRIFLGDQDAPEYTIVEGEGAGGSATVTVIKTN
TDTIRPFVVAAILKDVVFTPERYASFIDLQDQLHRNLCRQRTLVAIGTHDLDTVEGPFVY
DARPPTEIEFVPLTPDDRGAFNAKDLMEYYETEVAVKHLKPYVPIIKNSPLYPVIVDSQN
RVLSLPPIINGTHSKITLDTKNVFIECTATDLTKANIVLDTVVTMFSEYCAKPFTVVPVK
VDYQDDSGNIVDSYVSPMLSKRRETAKIDFCNSLIGINLSPTEIQNLCNKVQLGPAQLLE
NDTILEVTVPPTRSDILHAVDIAEDIAIAYGYNNIVKRVPKTNTVGGAEPLNQVGDLLRE
EIGRAGYTEVLTHGLCSIHDNFTALQCPVREDWAVSLSNPANIEYQVVRTTLLPGLLKTF
QHNKSASFAQGFKLFEISDAVVIDRENSITDTIVGARNVRKLCAAYAGPTSGFEIIHGLV
DRIMTLMEVAPEASYVATSGKKSSATGGADEEKYRISREGWYYTIAELPYNGNAHESKMY
FPGRAAQVLLTKPSHKEKIRVGTFGILHPLVLKNFDIQYPSSVVEIDLEELM
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgccaactgttgctttggagaaagatcaattatttacccatttgggtcgaacctacacg
gatgatgaatttgatgaattatgtttcgaatttggtgtcgaactcgatgagattacatcg
gaacgagaagaggcggaaaaatcgagcaccgtcaaattaagtaaacaacaaatcgcggaa
ttatccgaaaatgtgatctacaagattgatattcctgccaatcgttatgatttgctatgc
gtggagggattatgtcgaggattacgtatctttttaggagatcaagatgcacccgaatat
actatcgtggaaggagaaggagcaggaggatcagcaaccgtaacggtcatcaaaaccaat
acggataccatccgtccctttgtggtagcagctattttaaaggatgttgtctttacgccc
gaacggtatgcgtcctttattgatttacaagatcaacttcatcgaaacttatgccgtcaa
agaacgttggttgccatcggtactcatgatctggatacagtggagggtccatttgtgtac
gatgctcgaccacccaccgagatagaattcgttcctctcactcctgatgatcgtggtgca
tttaacgccaaagatctgatggagtactacgaaacggaagttgccgtcaagcatttgaaa
ccatacgtaccgatcatcaagaattcacctttgtatcctgtcattgtcgattctcaaaat
cgtgtcctctctcttcctcctattatcaatggtactcattcgaagattacattggatact
aaaaatgtctttattgaatgtaccgcaaccgacctaaccaaggcaaatattgtgttggat
acagttgttactatgtttagtgagtattgtgccaagcccttcacggttgtacccgtaaaa
gttgattatcaagacgattcgggaaacattgtggactcgtacgtttcacccatgctatca
aagagacgggaaactgccaagattgacttttgtaattctttgattggtatcaatctcagt
cctactgaaatacaaaatttgtgtaataaggtccaattgggaccggcacaactattggaa
aatgataccattcttgaagtgacagtaccacccacaagatccgatattcttcatgctgtc
gacatcgcggaagatatcgccattgcatacggctataacaacatcgtaaagcgagttcca
aaaactaatacagttggtggagcggaaccactcaatcaagtcggtgatttgttacgagaa
gaaataggccgtgcaggatacactgaagttttaacacatggtttgtgcagcatccacgac
aactttaccgctttgcaatgtccggtacgggaagactgggccgtttcattgtcgaatcca
gcaaatatcgaatatcaagtggttcgtaccacattgctaccgggactactcaagaccttt
caacacaacaagtcggcttctttcgcacaaggttttaaattatttgaaattagtgacgca
gttgtcatcgatcgtgaaaattccatcacggataccattgtcggtgctcgtaatgtacgc
aaattgtgcgcagcgtatgctggtcccacatcaggatttgaaatcattcatggtctagtc
gatcgaattatgaccttgatggaggttgcacctgaagcatcgtatgttgccacgtcgggg
aaaaaatcttctgccaccggaggagcggacgaagaaaagtatcgaatcagtcgggaagga
tggtattacactattgccgaactaccgtataatggtaatgcccacgaatctaagatgtac
tttccaggacgtgctgcacaagttttgttgacaaaaccttcccataaggagaaaattcga
gtaggaacctttggtatcttacatccgcttgtactgaagaattttgatatccagtacccc
tcttctgtagtcgaaattgatttggaagaattgatgtaa
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