Fragilariopsis cylindrus: FRACYDRAFT_275160
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Entry
FRACYDRAFT_275160 CDS
T04784
Symbol
TUBB_1
Name
(GenBank) putative beta tubulin
KO
K07375
tubulin beta
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy04145
Phagosome
fcy04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
FRACYDRAFT_275160 (TUBB_1)
09142 Cell motility
04814 Motor proteins
FRACYDRAFT_275160 (TUBB_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fcy03036
]
FRACYDRAFT_275160 (TUBB_1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
fcy04812
]
FRACYDRAFT_275160 (TUBB_1)
04147 Exosome [BR:
fcy04147
]
FRACYDRAFT_275160 (TUBB_1)
Chromosome and associated proteins [BR:
fcy03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
FRACYDRAFT_275160 (TUBB_1)
Cytoskeleton proteins [BR:
fcy04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
FRACYDRAFT_275160 (TUBB_1)
Exosome [BR:
fcy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
FRACYDRAFT_275160 (TUBB_1)
Exosomal proteins of colorectal cancer cells
FRACYDRAFT_275160 (TUBB_1)
Exosomal proteins of bladder cancer cells
FRACYDRAFT_275160 (TUBB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
DUF6684
Tubulin_2
DUF3334
Motif
Other DBs
NCBI-ProteinID:
OEU17649
JGI:
275160
UniProt:
A0A1E7FHJ6
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MREIVHVQAGQCGNQIGAKFWEVMSAEHGISPTGDYIGDNELQLQRINVYFNEGQEGRYV
PRAILTDLEPGTMDSIRSGVYGSLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSIMECV
RKEAEGCDMLQGFQATHSMGGGTGSGMGTLLVSKIKEEYPDRIISTYSVIPSPKVSDTVV
EPYNATLSIHQLVENADQCYALDNEALYDICFKTLKLANPTYSDLNHLIANAITGTTCSL
RFPGQLNCDLRKLAVNMVPFPRLHFFLVGFAPLTAFSSQSFRVLTVPELTQQAFDAKNMM
CAADPRHGRYLTCAMMFRGSMSSEEVDNEMLQMVNKHSSYFVEWIPNNLKASICDVPPKG
LKMSSVFIGNSTAIQEAWKRVADQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNLNDLVS
EYQQYQDATADEEDISGDFDDEAYGEE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaattgttcatgtacaagcaggtcaatgtggtaaccaaattggtgccaagttc
tgggaggtaatgtcggcggaacacggcatctctccaaccggtgattacattggcgacaat
gagcttcaattgcaacgaattaacgtgtacttcaacgaaggccaagaaggaagatatgtt
ccaagagccattcttaccgatttagagcccggaacaatggactctattcgttctggagta
tacggttctcttttccgtcccgataatttcatcttcggacaaagcggagctggtaataac
tgggcgaagggtcactacacggaaggtgctgaactcgtcgacagtatcatggaatgcgta
cgtaaggaggcagaaggatgtgatatgctccagggattccaagctactcactccatggga
ggaggaaccggatctggtatgggtactctacttgtatctaaaatcaaggaggaatatcct
gatcgtatcattagtacgtacagtgtcatcccatccccaaaggtctctgatactgttgtc
gaaccatacaacgccactctttccattcatcaacttgttgagaacgctgatcaatgttac
gctcttgataacgaagcactatacgatatttgcttcaaaaccctgaagcttgctaatcca
acatacagtgatttgaatcatttgattgccaatgctatcactggaacgacgtgttcgctc
cgattccccggacagttgaattgcgatcttcgaaagcttgctgtcaatatggttcctttc
cctcgtctacatttcttcttggttggtttcgctcccctcactgccttcagttcacaaagt
ttccgtgtcttgacggtacctgaattgactcaacaggcattcgatgctaagaacatgatg
tgtgccgctgatcctcgtcatggacgataccttacctgcgccatgatgttccgtggtagt
atgtcaagtgaagaggtcgacaatgaaatgcttcaaatggtcaacaaacattcttcgtac
tttgtggaatggatccccaacaacctgaaggcatcgatttgtgacgtcccccccaaggga
ctgaagatgtctagtgttttcattggtaactccactgcaatccaagaggcatggaagcgt
gtggctgatcaatttactgtcatgttccgtcgtaaggctttccttcattggtatactggt
gagggtatggacgaaatggaattcactgaggctgaatcgaacttgaacgatcttgtgtcc
gaataccaacagtaccaggatgcaaccgctgatgaggaagatatttcaggcgactttgat
gatgaagcttatggcgaagaataa
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