Fragilariopsis cylindrus: FRACYDRAFT_275634
Help
Entry
FRACYDRAFT_275634 CDS
T04784
Symbol
TIM_GAPDH1
Name
(GenBank) triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase precursor
KO
K00134
glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:
1.2.1.12
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy00010
Glycolysis / Gluconeogenesis
fcy00710
Carbon fixation by Calvin cycle
fcy01100
Metabolic pathways
fcy01110
Biosynthesis of secondary metabolites
fcy01200
Carbon metabolism
fcy01230
Biosynthesis of amino acids
Module
fcy_M00001
Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
fcy_M00002
Glycolysis, core module involving three-carbon compounds
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
FRACYDRAFT_275634 (TIM_GAPDH1)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
FRACYDRAFT_275634 (TIM_GAPDH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fcy04131
]
FRACYDRAFT_275634 (TIM_GAPDH1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fcy04147
]
FRACYDRAFT_275634 (TIM_GAPDH1)
Enzymes [BR:
fcy01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.12 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)
FRACYDRAFT_275634 (TIM_GAPDH1)
Membrane trafficking [BR:
fcy04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
FRACYDRAFT_275634 (TIM_GAPDH1)
Exosome [BR:
fcy04147
]
Exosomal proteins
Proteins found in most exosomes
FRACYDRAFT_275634 (TIM_GAPDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TIM
Gp_dh_C
Gp_dh_N
DapB_N
ADH_zinc_N
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
OEU15338
JGI:
275634
UniProt:
A0A1E7FAZ8
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MQSSIASTASKVATRAYSSSARVEARKFFVGGNWKCNGTVGQSKDLVSMLNQSTLSTDTE
VVVCPSQIHAQSVHENLRGDISVGAQDVWTQGNGAFTGETSAEMLTDMGIKWTLVGHSER
RGKGEQNPEVAAKAKYALDKGLSVIACCGEPLENREAGTTNDYVFPQIAAYAEQFDKADW
AKVVIAYEPIWAIGTGLTATPEQAQETHAAIRQYIAETVGADVAADVRILYGGSANAKTA
PGLSAKEDIDGFLVGGASLKPEFADIVNCQGTLNSLKPVNIGINGFGRIGRLVMRAAQDD
PMVNIVGVNDPFIGTKYMEYMFKHDTTHGTYSGSVNCIDESHIEIDGKTIKVFEEMDPSK
IAWGDAGVDYVVESTGAFTTTESASAHMKGGAKKVVISAPSPDAPMFVMGVNQEKYESSM
DVVSNASCTTNCLAPLAKVINDEFGLKEGLMTTIHAVTATQQTVDGPSKKDWRGGRAGCY
NIIPSGTGAAKAVGKVLPELNGKLTGMSFRVPTINVSVVDLTARLERGASYETVCAAIKD
ASEGSMKGILGYQNTDIVSSDFISDTHSSVFDEKAGIALTDDFVKLVSWYDNECGYSNRV
LDLIKHMDVTK
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcctccatcgcatctaccgcatccaaggtagccactcgtgcttactcttcatca
gctcgtgttgaggcccgtaaattttttgttggcggtaactggaaatgtaatggtacagta
ggacaaagcaaggatcttgtatctatgcttaatcaatctactttgtcgaccgataccgaa
gttgttgtttgtccgtcgcagatccatgctcaaagcgtacacgaaaatcttcgtggtgat
atttctgttggtgcacaagatgtatggacacagggtaatggtgccttcactggtgaaacc
agtgctgagatgttgactgatatgggtattaagtggacacttgtcggtcattccgaacgt
cgtggaaagggtgaacagaatcctgaagttgctgccaaagcaaaatacgcacttgataag
gggctttctgtcatcgcatgctgtggagaaccattagaaaatcgtgaggcaggaacaacc
aacgactacgttttccctcaaatcgcggcctatgccgaacaattcgacaaggctgactgg
gccaaggttgttattgcgtacgaacctatctgggcaattggaactggtcttaccgcaaca
cctgaacaagctcaagaaacgcatgctgccatccgtcagtacattgcagaaaccgtcgga
gccgacgttgctgccgatgttcgtattctttacggtggatcagcaaatgctaagactgca
cctggtctttctgccaaagaagatattgatggattcttggtcggtggagcttctctcaaa
cctgaatttgctgacattgttaactgtcaaggaacattaaacagtttgaaacctgtcaat
attggtatcaacggtttcggtcgtatcggacgtctcgtcatgcgtgctgcacaagacgat
cctatggtcaacatcgtcggtgttaacgatccttttattggtaccaaatacatggaatac
atgttcaaacatgataccacccacggaacatactccggttctgtcaactgtatcgacgaa
tctcacattgagattgacggaaagacaatcaaggtctttgaagaaatggacccatccaaa
attgcatggggtgatgctggtgttgactatgttgttgaatctactggtgctttcacaaca
actgaatctgcttctgctcacatgaagggtggagctaagaaggttgtcatctctgctcct
tcccctgatgctcctatgtttgtcatgggtgttaatcaagaaaagtatgaatcatccatg
gatgttgtctcaaatgcttcatgtacaacaaattgtttggcaccacttgccaaagttatc
aatgatgaatttggtttgaaggaaggtcttatgaccactatccatgctgtcactgccaca
caacaaactgttgatggtccatccaagaaggactggagaggaggacgtgctggatgctac
aatatcattccttctggaacaggagctgccaaagctgttggtaaagtccttcctgaattg
aatggaaaattgactggtatgtcattccgagttcctaccatcaatgtttctgttgttgac
ttgacagctcgtttagagagaggtgcatcttacgagactgtatgtgctgctatcaaggat
gcatcagaaggttcaatgaagggtatcttaggataccaaaacactgatattgtttcatct
gatttcatttctgatactcattcttctgtctttgatgaaaaggctggaattgctttgact
gatgactttgtgaagcttgtgtcttggtatgacaacgaatgtggttactctaaccgtgta
ttggatttgatcaaacacatggatgttaccaaataa
DBGET
integrated database retrieval system
