Fragilariopsis cylindrus: FRACYDRAFT_278371
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Entry
FRACYDRAFT_278371 CDS
T04784
Symbol
LHCR1
Name
(GenBank) fucoxanthin chlorophyll a/c protein
KO
K08916
light-harvesting complex II chlorophyll a/b binding protein 5
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
fcy00194
]
FRACYDRAFT_278371 (LHCR1)
Photosynthesis proteins [BR:
fcy00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCII
FRACYDRAFT_278371 (LHCR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chloroa_b-bind
Motif
Other DBs
NCBI-ProteinID:
OEU06688
JGI:
278371
UniProt:
A0A1E7ELA3
LinkDB
All DBs
Position
Unknown
AA seq
306 aa
AA seq
DB search
MRSTSIIIATSFAHTALAFTLKGGNSNSNTMTTKIQASSVSDDVKQKQQQISDPLGLYPQ
DSTERQLGLIQPLESSSQSQDQTLIDPLGLYSQDTQERQSGMIEPLLSGPQAQDKTVFDP
LSIYQDRSELTNDVVMSASLPFLKRPAALDGSLPGDRGFDPFNFSSDDSKLLWYREAEIK
HGRLAMLASVGWVLSELTHNTFASQLDLDSLLGFSDKVPSVLNGDRREPGDFNFDPLGLG
GNDYQQKFDKQEAEIFNGRLAMLGITGFAIQEFFLNDAVINQTPIFFKPFGDVVAQLMES
GAANSL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagatctacatcaatcatcatcgcaacttccttcgcgcatacggcgttggcctttact
ctcaaaggaggcaacagtaacagtaatacgatgacaacgaagattcaagcatcatctgta
tccgacgacgtcaagcaaaagcaacaacaaatttctgacccacttggtctatatcctcaa
gattcgacagagagacaactaggcttgatccaaccacttgagtcatcttcgcagtcacaa
gaccagaccttaatcgacccactaggtttatattctcaagatacacaggagcgacaatct
ggtatgatcgaacctcttttatcaggaccacaggcacaggacaaaactgttttcgatccg
ctatcaatttaccaagacagatcggagttaacaaatgatgttgtcatgtctgcatctcta
ccttttcttaaacgtccagctgcgctcgatggaagtttacctggagaccgcggatttgat
ccgttcaatttttcatcagatgattcgaaattactatggtacagagaagctgaaatcaaa
catggacgccttgctatgttagcctccgttggttgggtattaagcgaacttacccacaac
acatttgcttcacaattggatcttgattctttgttgggcttctctgataaggtcccatct
gtcttaaatggtgatcgacgagaaccaggtgatttcaattttgatccattgggattaggt
ggaaatgattatcaacaaaagttcgacaagcaagaggcagagatctttaacggtcgtctg
gctatgcttggaatcacaggctttgcaattcaagaattcttcctcaacgatgctgtcatt
aatcaaacaccaattttcttcaaaccttttggtgatgttgttgcacaattgatggaatct
ggtgctgcaaatagcctgtaa
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