Candidatus Fermentithermobacillus carboniphilus: IMF26_01995
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Entry
IMF26_01995 CDS
T09838
Name
(GenBank) bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
fcz
Candidatus Fermentithermobacillus carboniphilus
Pathway
fcz00900
Terpenoid backbone biosynthesis
fcz01100
Metabolic pathways
fcz01110
Biosynthesis of secondary metabolites
fcz03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
fcz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
IMF26_01995
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
IMF26_01995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
fcz03011
]
IMF26_01995
Enzymes [BR:
fcz01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
IMF26_01995
Ribosome [BR:
fcz03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
IMF26_01995
Bacteria
IMF26_01995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
S1_2
Spt6_S1
OB_RRP5_4th
Fe-ADH
Fe-ADH_2
DUF2110
BPL_C
Transketolase_C
DUF2187
Motif
Other DBs
NCBI-ProteinID:
QUL98872
UniProt:
A0AAT9LF73
LinkDB
All DBs
Position
complement(415127..417235)
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AA seq
702 aa
AA seq
DB search
MTEIKLARFRGYCFGVRRAIDMVERALDEGPYPIWTLGPVIHNPAVVQSLLERGVRMART
PEEAREGTLVLRTHGTTLEEMRRLPDVRIIDATCPFVLRAQKKAKEFTASGKIVLLVGDR
EHPEVRSILSHAGAGALCVRDASELDQAVKNLEGRPVAVIAQTTARKNEVEKVINELKKR
GISVELANTICTATEERQMATLELAKECDLVLVVGGRTSANTNQLLRIARENGAEAYLVE
SADDVLPGWLSGKRRVGVAAGASTPDRVIKEVVGKVEELQKSNQEDKPEELREKEESGSA
ANQGGKTPESEQGEVGVAGDRTAKELYDQSFKTLQEGQIVRGRVVSVDDNGVLVDVGYKS
EGLIPASELQRKGAFQPEKLSPGDEIMVYVLSADSGEGGLRLSKRKADEELAWRRLEEAY
REKTIIEAPVVQEVKGGLVVDVGLRGFVPASQVERGYVNDLSKYVGKTLRMKVLELDRSK
NRVILSQRVVLEEEHERLCQETWATIAEGQVRRGVVKGITDFGVFVDLGGVDGLLHISEL
SWGRVKHPSEVVKEGQEIEVKVLRVDKEKGKISLGRKQVLPDPWDSVENKYPVGSVVEGE
VTRTAPFGAFVELEPGVEGLVHISEISSKHITKPEEEVNAGDRVMVKVLRVRPEERKISL
SIKQADQTLLETKEKTVTSEGLVDPEAQGPAVAENGETKPEA
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgactgagataaaacttgctcgtttcaggggatactgtttcggcgtcaggagagccatc
gacatggttgaacgagctctcgatgaaggcccctaccctatttggacgctcggacccgta
atccacaatccggctgttgtgcagagtcttctggaaagaggcgtgaggatggcccggact
cccgaagaagctcgtgaggggactcttgtcctcaggactcatggtaccactctcgaagag
atgcgccgcctgcctgacgtgaggatcatagatgctacgtgtccttttgttttgagggct
caaaaaaaggcgaaagagttcacggcttcgggaaagatcgtgcttttggtaggcgaccga
gaacatccggaagtccggtcgatcctttctcacgcgggggccggtgctttatgcgtcaga
gatgcctccgaactggaccaagctgtaaaaaacctcgaaggccgccccgtggcggtgata
gcccagacgactgcgaggaaaaatgaggttgaaaaagtcataaacgagctgaaaaaaaga
ggtatttcggttgaactcgcgaatactatctgcactgccaccgaagaacgacaaatggcc
accctcgagctggcgaaagagtgtgaccttgtactcgtggtgggaggaaggacaagcgcc
aacaccaaccagctgttgaggatagccagggagaacggtgcagaagcttatttagtcgag
tcggccgatgatgtcttgcccgggtggctttcgggcaagcgcagggtaggcgtggcggcg
ggtgcgtctactccggaccgggttataaaggaggttgtaggcaaggtggaggaattgcag
aagtccaaccaggaagataagccagaagaactcagggaaaaagaagaaagtggatctgcg
gctaaccaaggcggtaagacgccggaaagcgaacaaggcgaggtgggcgtcgcaggcgat
aggacggcaaaagaactttacgaccaatccttcaagacactgcaggaagggcagatcgta
agaggacgggtcgtttcggttgacgacaacggggtcctcgtggatgtcgggtacaagtcc
gaaggcctcatccctgcgtcggaacttcagagaaaaggcgccttccagccggaaaagctt
tcaccgggagacgaaatcatggtctatgtcctgagcgctgattctggcgaaggaggccta
cgactctccaaacggaaggccgacgaggaactcgcctggcggcgacttgaggaagcgtac
agggaaaagacgatcattgaggctcccgtggttcaggaggtcaagggagggcttgtagtc
gatgtggggcttcgcggattcgttcccgcctcccaggtagaacgcgggtacgtcaatgat
ctatccaaatatgtgggcaagacgctacgtatgaaagtgctggaactggataggtcaaag
aaccgggtaatcctatcccagagggtggtcctggaagaagagcacgagaggctttgccag
gagacgtgggcgaccatagccgaggggcaggtcaggcggggcgtggtaaaaggcatcaca
gatttcggcgtcttcgtcgacctgggcggcgttgatggtcttttgcacatttccgaactg
tcctggggaagagttaagcatccttccgaggtagtcaaggaagggcaggaaatcgaggtc
aaggtcttgagagtcgataaagaaaagggaaaaatctccctagggcgcaaacaggtgctg
ccagatccatgggattctgtggaaaacaagtatccggtaggttctgtcgtggaaggggaa
gtcaccaggacagctcctttcggggcgtttgtggaactcgagccgggtgtggaaggtctt
gtacacatatccgagatttcttcgaagcacatcaccaaacctgaggaagaggtaaacgcc
ggagaccgggttatggtcaaggtgctccgggtgaggcccgaagagcgcaagatcagcctc
agcataaaacaggcagaccagacgctgcttgagacgaaggagaagaccgtcacctccgaa
gggcttgttgacccggaagcccagggccctgcagtggctgaaaatggcgagacaaagccc
gaagcttga
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