Candidatus Fermentithermobacillus carboniphilus: IMF26_02880
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Entry
IMF26_02880 CDS
T09838
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
fcz
Candidatus Fermentithermobacillus carboniphilus
Brite
KEGG Orthology (KO) [BR:
fcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcz03400
]
IMF26_02880
Enzymes [BR:
fcz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IMF26_02880
DNA repair and recombination proteins [BR:
fcz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
IMF26_02880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
DUF2059
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QUL99029
UniProt:
A0AAT9LEA6
LinkDB
All DBs
Position
complement(588772..593010)
Genome browser
AA seq
1412 aa
AA seq
DB search
MTDAKTIWTSEQKLAIGLRGKNLLVSASAGTGKTSVLVERIIAHLLWDDPVTDIERLLVV
TFTEKAALEMKERVRASLEAAAEKNPGDTRLERQLSYVDRAHISTIHSFCLGIIRRYFYK
VGLDPSFRVLDEKEAELLRTEALEDVFEEWYGRSADFWDGGAPENVPSAEGGSPLEGDFF
REGPIFRAGPGSPRGHVEDAARFFPGLVERYGGRGVDEDLKGIILRLHDFVRSQPSQISW
LEHVIKDAARWLSDPGGKTLLRLPWTRVLLEALADDLDEAIAFAEEAKRISASPGGPGDY
LPLLEKELAVYREAREFTLKAIAACGCVPDATSEAVESAGLEALGALREISGYKHERLPG
KKIDCDPELREKAKSLRDLAKRAFSRLEECSILRPAEELVEEMRKTLPYLYCLSALVADF
DRKYSEKKLERGGLDFADLEKYCLEILTMDDGLLAEEVRKEFDYVLVDEYQDTNPVQEEI
LSIVSKPGNLFMVGDLKQSIYRFRLAEPGIFLGKLRRYSRVADDGKFGPDAPGLLVELSR
NFRSRREIIDAVNYVFEKIMTRNRAGIDYGAGHRLNAGASYPEPSATAGGSEGARGTAEG
SGGNPYLAELHLVERNSVSRENDAATQGNGSSAGESGESPGEDPDYDPSADSEIEEYEAL
EKEALVVAAKIKELVNPGRPFMVWDTAKKRARPCTYRDIAVLMRATRDRANAVLEIFQRC
DIPSYCDLGTGYFRAREVEVALALLSVIDNPRQDIPLAAVLRSPVVGLEPRDLAIIRTRC
RGTDFYDSVRGFARQAPDDPVGKTRESPGSEVLLRNEQSPGGPREGDAGGENLKDLARIR
RAVSDFLERLERWRTMARRLPLAEVLWTVLSETGYYDYVGGLPGGAQRQANLRALVDRAM
EFDSFGRHGLFRFLRFIERIEETKGDLGTARALGEHEDVVRIISIHKAKGLEFPVVFLMD
LGKIFNMEDTRPDILFHRDLGLCPMYCDLATRVKYPTVAHAAASVRIRKENLAEEMRVLY
VGMTRAREKLFLVGSARNLEKQKQKWEAGKFSSAQSYLDWLCPAILGEGQFADVPVLVKF
WGTPGGQEVPQPFSRPAGESDLLWKDVRRLIPPPFSPDPKIYPEVRRRLEWRYSRAPFSQ
TLAKMSIQEFKRRIDEDEEDYWRFIPSPDKRPGFLTRKAPGGVEKGTAVHVLLARMSLEK
GGEEAGVRSEISRLADMGLLDNELIDDGDVERIVRFFRSPTGRVLSASQGKVKREVPFTL
GVPAYIPPETRISPPGDPSCPSWPEMAPLASEPSVILDFGIYGGAAVPDGSGAWARETVV
VQGVIDVLLEEDDGFVILDYKTDDLAPTEVPRAVRRYTPQVSLYALAVERILGKRVKRAL
LAFLGPGVEVEVDWKGYLSRAKTMDNPVSRVM
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
gtgactgacgccaagacgatctggaccagcgagcagaaactggccatcggcttgaggggc
aagaaccttctggtttcggcgtcggcgggaaccggtaaaacttccgtcctcgtcgagcga
atcatcgcgcaccttctatgggacgatccggttaccgacatcgagcggcttttggtggtt
acgtttaccgaaaaagctgcgcttgaaatgaaagagagggttagggcttcgctcgaagcg
gcagccgaaaagaacccgggtgatacccgcctcgaaaggcagctttcatatgtggatagg
gctcacatatctacgatccactcgttttgcctcggcataatccggcggtacttctacaaa
gtggggctggacccttctttcagagtactcgacgagaaagaggcggaactcttgcggacc
gaggctttggaggatgttttcgaggaatggtacggtcgttcagcggacttttgggacggt
ggggctccggaaaacgtcccttccgctgaaggcggttctcctttagagggcgattttttc
agggaaggacctattttcagggcagggcccgggtcaccgcggggccatgttgaagatgct
gccaggtttttcccggggcttgtagagcgatacggaggccgcggggtagacgaggatctc
aagggcattatcctgaggctccacgattttgtgaggagccaaccgtcgcagatctcctgg
cttgaacatgtgattaaagatgccgcgagatggctcagtgatcccggtggtaagactctc
ttgaggttgccctggacaagggttctcctcgaggctctggcagacgatcttgatgaggcc
atagcttttgcagaggaggcgaagaggatatctgcgtcgcccggaggacccggtgactac
cttcctctacttgaaaaagaacttgccgtgtaccgtgaagccagagagtttaccctgaag
gccatcgctgcttgcggatgtgtacctgatgcgacgagcgaggcggttgagtcagctggc
cttgaagccctaggggcattgagagagatttccggatacaagcacgagagactccccggg
aagaagatagactgtgatccagaactgagagaaaaggccaagtccctgcgggacctggct
aaacgggctttttcccggctagaggaatgcagcatcctacggccagccgaagaacttgtc
gaggagatgaggaagacccttccgtatctatactgtctttcggctctggtggccgacttc
gaccggaaatacagcgagaaaaaactggaacggggtggtctcgactttgccgacctggag
aaatactgtctcgagatcctgacgatggatgacggccttctggccgaagaggtccgaaag
gaattcgactacgtcctggttgacgagtaccaggatacgaacccggtgcaggaagaaatc
ttatctatcgtgtcaaaaccggggaatcttttcatggtgggtgacctgaagcagagcatt
tacagattccgcttggctgaacccggcatcttccttggaaaactccggcgctactccagg
gttgccgacgacggcaaatttggaccggacgcaccggggctcctcgtggagctttcccga
aacttccgtagccgtagggaaatcatcgacgcggtgaactatgttttcgagaaaatcatg
accaggaaccgggccggcatagactacggggccggacacaggttgaacgcaggcgcctca
tatcctgaaccctccgcaacggctggtggatcagaaggtgctcgagggactgctgagggt
agcgggggaaatccgtaccttgcagaacttcacctcgtagagcggaacagcgtttctcga
gaaaatgatgcagctacccagggcaacgggtcctcggcgggtgagtccggagaatctccc
ggagaagaccctgattatgacccaagcgccgattccgagatagaagagtatgaggctctg
gaaaaggaagctcttgtggtggcagccaagatcaaagaactggtcaacccaggaaggcca
tttatggtttgggataccgcgaaaaagcgcgcaaggccttgtacctatagagatatcgcg
gtcctcatgcgggcgaccagagaccgtgccaatgcggtcctcgagatattccagcgctgc
gacattccttcttactgcgacctcggtaccgggtactttcgggcaagggaagtcgaggtg
gccctggccctgctctcggtcatcgacaaccccagacaggacatcccgctggccgcggtg
ttgagatctcccgtggttggcctggaacctcgggatctcgccatcatccggacgcggtgc
aggggaacagacttttacgattccgtgagaggttttgcccggcaggcgcctgatgacccg
gtgggcaagacgcgggaaagcccgggttccgaggtgttgctgagaaatgagcagagtccg
ggtggaccccgagaaggggatgcgggcggagaaaacctcaaagacctcgccagaatccgc
agggcagtctctgacttcctcgagagacttgagaggtggcggacaatggcgaggaggctg
cctctggcggaggtcctgtggacagtcctctccgagaccggatattacgactacgtaggc
ggtcttccgggtggagcccagcgtcaggcaaatctcagggcgctggtggatcgggctatg
gagtttgactcctttggccgccacgggctgttcagatttctcaggttcatagagaggatc
gaggagaccaagggcgacctcgggacagcgcgggctctaggcgaacacgaggacgtggtg
aggatcatctcaattcacaaagcaaaaggtctggagtttccggtcgtgtttctcatggac
ctgggcaagatctttaacatggaagatacgcggcccgacatcctcttccaccgcgatctg
ggactttgcccgatgtactgtgatcttgcgacgagggtaaagtatcccacggtggcccac
gcggcggcatccgtgcggataagaaaagagaacctcgcagaggagatgcgggtcttgtat
gtgggtatgacccgggcaagggaaaaactcttccttgtcgggtcggcgagaaatctagag
aagcaaaagcagaaatgggaggccgggaagttttcatctgcccagtcgtacctggactgg
ctctgtcctgcgatcctgggcgaaggacaattcgcagacgtaccggtcctagtcaagttt
tgggggaccccgggtggtcaagaggtaccgcagcctttctccaggccagcgggcgaaagc
gaccttttatggaaagatgtaaggcgactcattccgcctccgttctccccggatccgaaa
atatatccagaggtcaggcgaaggctcgagtggcggtactcgcgtgctcctttcagccag
actttagccaaaatgagcatccaagagtttaaacgacggattgacgaggacgaagaggat
tactggcgcttcataccttctcccgataagaggcccggttttttgacaaggaaagccccg
ggaggtgttgaaaaaggtacggcggtgcacgttctcctggcaaggatgtcccttgaaaaa
gggggagaagaggcgggcgtcaggagcgagatctctcgcttggctgacatgggtcttctg
gacaacgagctgatagacgatggggacgtcgagaggatagtccggtttttcaggtctccc
acagggagggtgctttctgcttcacaggggaaggtcaagcgagaagttcctttcacgctg
ggagttcccgcatacattccgcccgaaacccgaatctccccccctggtgacccatcctgc
ccgtcttggccggagatggcacctctggcatccgagccctcagttatactggattttggc
atttacggcggggctgccgttcccgacggttcaggcgcttgggcccgggagacggtggtc
gttcagggcgtcatcgacgtcctcctggaggaggatgacgggttcgtgatactggattac
aagacggacgatttagccccgacggaagtgccacgtgccgtaagaagatatacgcctcag
gtatccctctacgcccttgcggtcgagaggatcctggggaagagagtgaaacgtgccttg
ctggcgtttctcggtcccggcgtggaagtcgaggtagactggaagggttacctatcacgc
gccaagacaatggacaaccccgtatccagagttatgtga
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integrated database retrieval system
