Candidatus Fermentithermobacillus carboniphilus: IMF26_02940
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Entry
IMF26_02940 CDS
T09838
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fcz
Candidatus Fermentithermobacillus carboniphilus
Brite
KEGG Orthology (KO) [BR:
fcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fcz03016
]
IMF26_02940 (truB)
Enzymes [BR:
fcz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IMF26_02940 (truB)
Transfer RNA biogenesis [BR:
fcz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IMF26_02940 (truB)
Prokaryotic type
IMF26_02940 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QUL99040
UniProt:
A0AAT9LDB3
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All DBs
Position
complement(606646..607611)
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AA seq
321 aa
AA seq
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MDGFVNVLKPPGLTSHDVVLEVRRILGENKAGHLGTLDPSARGVLPVALGSYRRLAEYFL
DDDKDYVAEFIFGVRTDTGDLDGDVVARKHAGSLSPGQVREHLARLTGSILQVPPMVSAV
KVRGKRLYELARKGVTVEPQPRPVTVHRFEMLGWVPGVHPRGVFFLRVGRGTYVRALADS
LGESLGCGAAVSFLLRSRVGRFYLKDGHTIASLELAKKEGRLASILADPLEVLSPFARFE
VKSEALEKIRNGTPLETGDFEDPGSLTSWMRKEATGNEKRRSLFLGTHFSREDGCRKIVA
VLSTAAGSTLACKIKYEKVLI
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggacggatttgtgaatgtcctaaaaccccctggcttgacctctcacgacgtggtgctg
gaagtgcggaggattctcggtgaaaacaaagccgggcatctcggcactttagacccgtct
gcgagaggagttcttcctgtggcgcttggttcgtacaggaggctcgccgagtatttcctg
gatgacgacaaagactacgtggctgaattcattttcggggtgcgtaccgacactggagac
ctcgatggcgatgtggtggcgagaaaacatgctggatcgctttcgcccggccaagtccgg
gagcaccttgcgcgcctaaccggaagcatcctgcaggtacctcccatggtttccgccgtg
aaagtgagggggaagagactttacgaactggcgagaaaaggcgtcacagtcgaaccacaa
cccaggcctgttacggtgcaccggtttgagatgctcgggtgggttccgggcgttcacccg
aggggtgtgttctttctccgggtcggcagaggcacttacgtgagagcgctcgcagactcc
cttggagaatctttgggttgtggagccgccgtgtcttttcttttgcgctcaagagttggg
aggttttacctcaaagacggccataccatcgcttctctcgaacttgcgaagaaagaagga
aggcttgcctcgatccttgccgatcctctcgaagttctatccccttttgccaggttcgag
gtgaaaagcgaggcactggagaaaatcagaaacggaacaccgcttgaaaccggcgatttt
gaggatcccgggagtttaacctcctggatgaggaaggaggcgaccgggaatgaaaaacgt
cggtctctcttcttggggacgcatttttcgagagaagatggctgccggaagatagtagcc
gtgctctctaccgccgcgggctcgacacttgcgtgtaaaatcaagtatgagaaagttctc
atctag
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