Candidatus Fermentithermobacillus carboniphilus: IMF26_05415
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Entry
IMF26_05415 CDS
T09838
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
fcz
Candidatus Fermentithermobacillus carboniphilus
Pathway
fcz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IMF26_05415 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcz03400
]
IMF26_05415 (recO)
DNA repair and recombination proteins [BR:
fcz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IMF26_05415 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
IMF26_05415 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF7564
Motif
Other DBs
NCBI-ProteinID:
QUL99477
UniProt:
A0AAT9LEL7
LinkDB
All DBs
Position
complement(1134802..1135668)
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AA seq
288 aa
AA seq
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MLYQAEGIILSQTDLGEYDKTVTIFTREEGMVKAVVKGARRAKAKLGALTQPFTHGLFQL
WRGRSMDRVIQVAVKASHGGLMEDYARMVYAGYLAELLLELIPQREKNETQFLFFRSVLD
CLERKEDPWPVVRWAELGILSEAGFGPSFSHCVICGKMPDGPSFTFSMKHGGIVCENCHS
RAWSQAGGGHEEAAVLKVNGDSAGYKSPDSEFFIISPGSRKTLEILLDEARNSIIPGDAL
PCPRITAKGKVRSEVGRLVKRYVSFVLEKRLKSMDLVESIEDDGAMNH
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
ttgctctatcaggcggaagggataatcctttcccagacggacctgggagaatacgataag
acggtgaccattttcaccagggaagagggtatggtgaaggccgtagtcaagggtgcccgc
agggccaaggcaaagctcggtgccctgacgcagcctttcacccacggtcttttccagctc
tggagaggccggagtatggatagggtgatccaggtagcagttaaagcgtctcacggtggt
cttatggaagactacgccaggatggtctacgcgggttacctcgccgagctcctgctggag
cttatcccccagagggagaaaaatgaaacccagttcctctttttccgttccgtcctggac
tgccttgaaaggaaggaagatccgtggcccgtcgtgaggtgggcagaactgggaatcctt
tcggaagcgggttttggcccgtcattctcacattgtgtgatatgtgggaaaatgcccgac
ggcccatccttcactttctcgatgaaacacggtgggattgtgtgtgaaaactgccacagt
cgcgcctggtcccaggcgggcgggggccacgaagaggccgcagtcctcaaggtcaacgga
gattctgccgggtataaaagccccgatagtgagtttttcattatatccccgggtagccgg
aaaaccctggaaatccttttggatgaagcccgcaactcgatcattccgggcgacgcgttg
ccctgcccgaggataacggccaaaggcaaagtccggtctgaagtgggacggcttgtcaaa
agatacgtatcttttgtcctcgaaaagcgtcttaaatccatggatttggtggaaagtata
gaagatgacggcgctatgaatcattga
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integrated database retrieval system
