Candidatus Fermentithermobacillus carboniphilus: IMF26_08080
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Entry
IMF26_08080 CDS
T09838
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
fcz
Candidatus Fermentithermobacillus carboniphilus
Pathway
fcz00550
Peptidoglycan biosynthesis
fcz01100
Metabolic pathways
fcz01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
fcz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IMF26_08080 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IMF26_08080 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fcz01011
]
IMF26_08080 (mrdA)
Enzymes [BR:
fcz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
IMF26_08080 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
fcz01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
IMF26_08080 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QUL98017
UniProt:
A0AAT9LCH3
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Position
1656195..1658069
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AA seq
624 aa
AA seq
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MSPTRDIFEERAQNLSQGELKKRKRTFTCIIAAVFVILAAQLFNLQVIQGERYRKLSQEN
YLRITPIPAPRGDILDRNGKTLVTSRPAFSVFYWYLDKEKAESTLPRLAGILGLDLGEIQ
KKVQQYSGRYFEPIPIAKDITPEQYTTIVEDAPNLPGVFIEPQPIRYYPEGELASPVLGY
VGEITDSQLKSERYKDYKMGDIIGQQGLESYYEDVLRGKDGGYQVEVDYRGRPTGNVGPG
IDPEPGKNVVLELDVDLQKAAEEALVKALKTSPKAKGAAAVVLDVKTGGVLVMASLPGFD
PNKLITGITQSELNQKIQSGQWRFANLATTGLYPPGSSFKIITAIAALAEGKVDPKEKIF
DPGYHPMAPTLVCHKRGGHGYVDLEEALAVSCNVYFYEMGRRLGVDTLAKYAKLLGLGEK
TGIDLYGENYGTVPSTEWKKKAYSENRVAQPEFLLSEHMMAAMGQVFHMDTPIQMASVVQ
AIANDGVRMKPRLARKIVDSQGNTVKEFAPEVSGTLGVSPDILETVKRGMLRVTSDKIGT
AYWAFYDFPVKVAGKTGTAQNPLGEDHAWFVGFAPYDKPEIALAVVVDQGGSGSAVAAPV
ARAIFEAYFLSKSSQGGVSSPEGR
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgagcccaacgcgtgacattttcgaggagagggctcagaacctttctcaaggtgagctc
aagaaaaggaaacggacgtttacctgtatcatagcggccgtgtttgtcatcctggcggcg
caactcttcaacttgcaggtcatccaaggcgagcgttaccgaaaactctcccaggagaac
taccttcgcataacgcccataccggctccgagaggtgatatccttgaccgtaacgggaaa
acgctcgtgacctcgaggccggctttttcggttttctactggtatctggacaaggaaaaa
gcggaatcgaccttgccccgcttggccgggattttggggctagacctgggtgaaatacag
aagaaggtccagcagtattctggaaggtacttcgaacccatccccatcgccaaagacata
actcccgaacagtataccaccatcgtcgaggatgcccccaatctgcccggtgtcttcatc
gaaccacagcctatacggtactatcccgagggcgaactggccagtccggtcctaggctac
gtgggcgagataaccgatagccagctcaagagcgagcggtacaaggactacaagatgggg
gatatcataggacagcaggggttggaatcttactacgaggacgtgttgagaggcaaggat
ggtggttatcaggtagaggttgactaccgggggagacccaccgggaacgttggacccggg
atagacccggaaccgggaaaaaatgtcgtactggagctggatgtcgatctccagaaagcc
gccgaggaagcactggttaaggcgcttaagaccagcccaaaggcaaaaggagccgcggcc
gtggtactggacgtcaagaccggcggagtcctggtcatggcgtcgttgcctggttttgac
ccgaacaaactgattaccggcataactcagtcggagctaaatcaaaagatacagtcgggc
cagtggaggtttgcaaacctggcgacgacgggactctatcctcctggctcctcgttcaag
atcatcaccgccatagcggcgttggcggaaggcaaagtcgatccgaaggaaaagatattt
gaccccggataccacccaatggcccctacccttgtctgccacaagcgcgggggtcacgga
tacgtagacctggaagaggctcttgccgtgtcctgtaacgtttacttttacgagatgggc
aggcgcctcggtgtggatacgcttgccaagtacgccaagttactgggacttggtgagaag
acaggtatagacctttacggtgaaaattacgggacggtgccaagtactgagtggaaaaaa
aaggcatattcggagaatcgcgtggcgcaaccggaattcctgttatcagagcacatgatg
gcggctatgggacaggtatttcacatggatactcccatacagatggcttcggtggtgcag
gccatagctaacgatggagtgaggatgaagccccgtctcgcgaggaaaattgtggattcc
cagggtaacacggttaaggaattcgctccggaggtttccgggaccctcggggtcagcccc
gatatcctcgaaacggtgaaacgcggtatgttgagggtcactagtgataagataggcaca
gcctactgggctttttacgattttccggttaaagttgcagggaaaacgggtacggcacag
aatccactgggggaagatcacgcctggttcgtcggttttgcgccgtacgataaaccggag
atcgctctggcggttgtagtagaccagggtggttcgggatctgcggtagcggctccagtt
gcccgggcgatattcgaggcatactttctgtccaagtcttcgcagggaggggtttcctcc
ccggagggccggtag
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