Candidatus Fermentithermobacillus carboniphilus: IMF26_08120
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Entry
IMF26_08120 CDS
T09838
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fcz
Candidatus Fermentithermobacillus carboniphilus
Pathway
fcz03420
Nucleotide excision repair
fcz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IMF26_08120
03430 Mismatch repair
IMF26_08120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcz03400
]
IMF26_08120
Enzymes [BR:
fcz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IMF26_08120
DNA repair and recombination proteins [BR:
fcz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IMF26_08120
MMR (mismatch excision repair)
Other MMR factors
IMF26_08120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
NACHT
Motif
Other DBs
NCBI-ProteinID:
QUL98024
UniProt:
A0AAT9LB66
LinkDB
All DBs
Position
1665162..1667123
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AA seq
653 aa
AA seq
DB search
MLPEEKKEKFLSDKILEGLNPRQIEAVTHTQGPLLILAGAGSGKTTVLTRRIAYLIARGV
SPGSILAITFTNKAANELKSRIEALLGDRAKDIWAMTFHAACARILRTEFPAVGRSGRFS
ILDAQDQIRIMRQVLKELNLSERQYPPSGILRMISGAKDNLLGPEEYAKRATTFYETRVA
QAYRAYQDKLNEQDGLDFDDLIMQTVILLRDNPAIREKYQRRFSHILVDEYQDTNRAQYV
LTKILADGHKNIAVVGDDDQSIYTFRGADIRNILEFEKDYPSCHVVKLEQNYRSTQVILD
GAYHVVSRNFFRKDKRLWTAKKGGKPILVYASLNEEDEARFVADEILKLLSPSRSFSSFA
ILYRTHAQSRTFEDVFMERGIPYSILGGLRFYERKEIKDAISYLRLIAYPKDYISLERVI
NEPPRGIGPASVRKIIDYAAREGISLVDALSRASSIKGLSQKAKKSAEELGNTLASVCER
ADTMPLHEMLAEILDRTGYRRFLEAEGTQESLGRLENLDQLLASLRVFSASGKGLYEYLE
SQTLVSDQDMYDEKKDACVMMTLHAAKGLEFDVVFMVGMEEGLLPHARSIGDERQIEEER
RLCYVGMTRAKEMLYLTFASHRETYLGTNSTRVSRFLQEIPRDLMEIRTWESR
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgctacctgaagagaaaaaagagaaattcctatcggacaagatccttgaaggactcaat
cccaggcagattgaagccgtgactcacacacaggggcctctcttgatcctggccggagca
ggcagcggaaaaaccaccgtcctcacacgccgcatcgcgtatctcatagccaggggagtt
tcccccggttccatccttgccataactttcacgaacaaggcggccaatgagctgaaaagc
cgcattgaggcccttttgggagatagggcgaaagacatctgggccatgacattccacgca
gcgtgtgccagaatactcaggacagagtttcccgccgtagggagatcgggccgtttttcc
atattggacgcccaggaccagataaggatcatgcggcaggtgctgaaagaactgaacctt
tcggaacgacagtatccgccttcggggatcttacggatgatatccggcgccaaagacaat
ctcctgggaccagaggagtacgcgaaaagggccactactttttacgagaccagagtcgct
caagcgtaccgcgcctatcaagacaagctgaatgagcaggacggcctggatttcgacgat
ctcatcatgcaaaccgtcatcctcttgcgggacaatccggcaatcagggagaaataccag
cgccggttctcccacatactggtagatgagtaccaggatacaaacagagcccaatatgtc
ctcaccaaaatcctggcggatggccataagaacatcgctgtggtgggcgacgatgaccag
agcatctatacgttcagaggtgccgatatcaggaatatactggagtttgaaaaggattac
ccttcctgtcacgtggttaagctcgaacagaactaccgctcgacgcaggtaatactcgat
ggagcgtaccacgtggtttcaaggaactttttcaggaaagacaagcggttgtggacggcg
aaaaaaggcggtaagccaatactggtctacgcttccttgaatgaagaagacgaggcgcgg
tttgtggccgacgagatattaaaacttctatcaccttccaggagtttcagctcatttgcc
atactgtaccggacccatgcccagtccaggacctttgaagatgttttcatggagcgaggg
atcccttattcgattttaggaggtctcaggttctacgaacggaaagagataaaggacgcc
ataagctacctccgccttatcgcttacccgaaggactacatttccctcgaacgggttata
aacgagccccccaggggtatcggtcccgcaagcgtcaggaaaatcatagattatgcggct
cgggaaggcatcagcctcgtagatgcactttcaagagcatcttcgattaaaggcttgtcg
cagaaagccaaaaaatcggcagaggaacttggaaacacgctggccagcgtttgtgaaagg
gccgatacgatgccgcttcacgagatgctggccgagatactcgacaggaccggttacagg
agatttctcgaagccgaaggcactcaggagagtctgggccgccttgaaaacctggatcag
cttttggcttccctgagagtgttttctgcgtcgggaaaagggctttacgaatatctggaa
agccagaccctcgtgtcggaccaggatatgtacgacgagaaaaaggacgcttgtgtcatg
atgaccctacatgccgcaaaaggccttgagttcgacgtggtcttcatggtgggtatggaa
gagggccttttgccgcacgcccgttccatcggggatgagagacaaatagaggaagaaaga
cgtctctgttacgtggggatgacccgggccaaagaaatgctttaccttacctttgcaagc
catagggagacttacctcggtaccaattccacaagagtgtcacgttttctgcaggagata
ccccgggacctcatggagataaggacgtgggaatcacggtaa
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