Flavobacterium dauae: NU10_00340
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Entry
NU10_00340 CDS
T09251
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
fda
Flavobacterium dauae
Pathway
fda03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NU10_00340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fda03400
]
NU10_00340
Enzymes [BR:
fda01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NU10_00340
DNA repair and recombination proteins [BR:
fda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NU10_00340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
WLD23881
LinkDB
All DBs
Position
complement(70786..71547)
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AA seq
253 aa
AA seq
DB search
MKILSYNVNGIRAAITKGFLDWLQAANPDIICLQEIKATQDQIPVLEITAAGYPYQYYFP
AEKKGYSGVAILSKTEPKKIVFGTGIDFMDKEGRNLRADFEDFSVMSLYLPSGTNIERLS
HKFQYMADFQNYINELKKEVPNLIICGDYNICHQAIDIHDPIRNAKVSGFLPEEREWLDT
FMKNGFVDSFRMLNPEPHNYSWWSYRANARNNNKGWRIDYHLVSENMKDRIKRAYILPDA
KHSDHCPVAVEIE
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttatcatacaatgtaaacggaattcgggcagcaattacaaaaggtttttta
gactggttgcaggcagctaatcctgatattatttgtttacaagaaattaaagcaacacaa
gatcaaattcctgtattagaaattacggcagcaggctatccatatcaatattattttccg
gcagaaaaaaaaggatacagcggcgttgccattttaagtaaaaccgaacctaaaaagata
gtttttggaaccggtattgactttatggataaagaaggaagaaaccttcgtgccgatttt
gaggatttttctgtgatgtcattatacctaccttcgggaacaaatatcgagcggttgagc
cataaattccaatatatggcagattttcagaattacatcaacgaactgaaaaaagaagtt
ccaaacctgattatttgtggcgattacaacatttgtcatcaggcaattgatattcacgat
cctatacgcaatgcaaaagtatcaggttttttacctgaagaacgcgaatggctggatact
tttatgaaaaacggatttgttgattcgttccgtatgttgaatccggagccgcataattat
tcgtggtggagctaccgtgccaatgcccgaaacaacaataaaggttggcgtattgactac
catttggtttcagaaaatatgaaagatcgtataaaacgagcttatattttgcccgatgcc
aagcactctgaccactgccctgtagcggttgaaattgaataa
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integrated database retrieval system
