Flavobacterium dauae: NU10_00740
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Entry
NU10_00740 CDS
T09251
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
fda
Flavobacterium dauae
Brite
KEGG Orthology (KO) [BR:
fda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fda03400
]
NU10_00740
DNA repair and recombination proteins [BR:
fda03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NU10_00740
Archaeal homologous recombinant proteins
NU10_00740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
MscS_porin
AAA_29
Med26
Terminase_6C
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WLD23947
LinkDB
All DBs
Position
complement(151105..154143)
Genome browser
AA seq
1012 aa
AA seq
DB search
MIPIKLTIEGLYSYQKRQTIDFENLINAGLFGIFGSVGSGKSSILEAITFALYGETERLN
AKDKRAYNMMNLKSDTAFIAFDFYNYEDKLFRVTREFKRNSKRFDDIKSPTVVFYEWINE
NWLPLNHSNAQEIVGLSYDNFKRTIIIPQGQFKEFIELGAKDRTQMMKEIFKLYRFDLSD
KVSVLNSKNLTQLNQLEGKLSGYDEVSEENIMILKGKLLEEETIQTEKQTVFKAINDKLQ
HLKSLKTDFESLQNKKNQFTEYNNQKPEIDQKKTQLEIYERVYKTFNQLLVDSKKTESEI
QEKTDQLAKDKALLQHSEANFLKIETAINELKPYFNDLPNKRLQENDLDFIAKILQFTID
VVELKNRTSNGEIKVSEIEKVVNQLQQTIKETEKEINDLAKKQIETTVLINVGDWFSKKQ
HLEKDWDLQEQKNNQLKSEIQLIENELKSDKIDVLTFENDVKVLNDTFSRQKKELTSKLQ
SFQVQQELAHFAHNLHNGEACPLCGSLEHPEILTLNDVTLNLNEIQNEINLVEEKQNNYV
EFANKIRQKIQKLTMFQDHFSNENNRLEDLKNQIVQLNAGFIWTDFNADDFEDFQHKKQT
SFDLTKQIELRNKFISEQRFNLENQQKTAEKYKKALEKFKLDEAEKQTQINQNLSNLKVL
DFADFNNFSVEEIEQKLNDLKAFNQKTENDFTLYNQQFNQLNTQIEVQKASISSEEIQLA
NLNKNLVELNDLFNKNLVDQNIENKEKVVEILHLNLNTEVIRKEIEEFTVAYKTLNNQIK
ELETKLKDEFFNKAAYHQYEKDFETAESELKTATENVTKTNAEITRLTEAFNQKKELLIT
LDQLKKRAENLKTMGNLFKGAGFVQYVSSIYLKQLCENANVRFRKMTRNQLSLQVNDAND
FEVIDYLNEGRTRSVKTLSGGQSFQVSLSLALALAESVQTNSLASKNFFFIDEGFGTQDA
ESVNIVFETLNNLHKENRIVGIISHVEELKERIPVALQITKTDEDGSLIKVV
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgatcccaattaaactcaccatagaaggtttatattcgtaccaaaaaagacaaaccatt
gattttgaaaacctgataaatgcaggtttattcggcatttttggttcggttggctcggga
aaatcatctattttagaagccattacttttgcgttgtatggagaaaccgaacggttgaat
gccaaagacaaacgtgcgtacaatatgatgaatttaaaatcggacacagcgtttattgcg
ttcgatttttataattacgaggacaaactatttcgggtaacgcgtgaatttaaacgaaat
tccaaacggtttgacgatattaaatcaccaacggttgttttttatgaatggataaatgaa
aattggcttccgctgaatcatagcaacgcacaagaaattgttggtttaagttatgataat
tttaaacgaaccatcattattccgcaaggtcagtttaaagaatttatagaattgggagcc
aaagacagaacccagatgatgaaagaaatttttaaactttatcgatttgatctgtctgat
aaagtatcggttttaaacagtaaaaatcttacccaattaaatcaattagaaggtaaattg
tcgggttacgatgaagtttccgaagaaaacattatgattttaaaaggaaaacttttagaa
gaagagacaattcaaaccgaaaaacaaactgtttttaaagcgataaacgataaattacag
catttaaaatcgttgaaaaccgattttgaatcgttacaaaataagaaaaatcagtttaca
gaatacaacaatcaaaaaccagaaattgatcaaaagaaaacgcagcttgaaatttacgaa
cgcgtttataaaacgtttaatcaattgttggttgacagtaaaaaaaccgaaagtgagatt
caagaaaaaaccgatcaattagcaaaagacaaagcacttttacaacattctgaagccaat
tttcttaaaattgaaactgctattaacgaattaaaaccatactttaacgatttgccaaac
aaacgtttacaagaaaacgatttagattttattgcgaaaatacttcagtttacaattgat
gttgtggagttgaaaaacagaacttctaacggcgaaattaaagtaagcgaaattgaaaaa
gttgttaatcaactgcagcaaaccataaaagaaaccgaaaaagaaataaacgatcttgct
aaaaaacagattgaaaccactgttttaatcaatgttggcgattggtttagcaaaaaacaa
catttagagaaagattgggatctgcaagaacagaagaacaatcagttaaaaagcgaaatt
cagctaattgaaaatgaattaaaaagtgataaaattgacgttttaacttttgaaaatgac
gtaaaagttttaaacgatactttttcacgacaaaagaaggaattgacttcaaagttacaa
tcgtttcaggtgcagcaagaattagcacattttgcgcacaacctgcacaacggcgaggct
tgtccgctttgtggttcgttagaacatccggaaattttaacgttgaacgatgttacactg
aatttaaacgaaattcagaacgagataaatttagttgaagagaagcagaataattatgtg
gaatttgctaataaaattcgacaaaaaattcagaagttaacaatgtttcaagatcacttt
tcaaacgaaaacaatcgtttagaagatttaaaaaatcaaattgttcaactcaacgcaggc
ttcatttggaccgattttaatgcagatgattttgaggattttcagcataaaaaacaaact
tcgtttgatttaacaaaacaaatcgagcttagaaataaatttatttcagaacaaagattc
aatttagaaaatcagcagaaaacagcagaaaaatataaaaaagcgttagaaaaatttaag
ttagacgaagcggaaaaacaaacgcaaatcaatcagaatttaagcaatttaaaagttctt
gatttcgcagattttaataatttttctgttgaagaaatcgaacaaaaattaaacgattta
aaagcgtttaatcagaaaacagaaaatgattttactttgtacaatcagcagtttaatcag
ttaaatacgcaaattgaagttcaaaaagcaagcatttcatcagaagaaattcaactagca
aacttgaacaaaaatcttgtggaattaaatgatcttttcaacaaaaatctggtcgatcaa
aatattgaaaacaaagaaaaagttgttgaaatacttcatttaaacttgaatacagaagtt
attcggaaagaaattgaagaatttacggttgcgtacaaaacactgaacaaccaaattaaa
gaattggaaaccaaactaaaagatgaatttttcaataaagcagcttatcatcagtacgaa
aaagattttgaaactgccgaaagcgaattaaaaaccgcaaccgaaaacgtgaccaaaacc
aacgcagaaattactcgtttaaccgaagctttcaatcagaaaaaggaattgttgataaca
ttagatcaactcaaaaagcgagcagaaaacctaaaaacaatgggtaatttgtttaaaggt
gctggttttgttcaatatgtatcgtcgatttatttgaaacaattgtgtgaaaatgccaat
gtacgtttccgaaaaatgactcgaaaccaattgagtttacaagtcaacgatgcaaacgat
tttgaagtgattgattatttaaacgaaggcagaacacgcagcgtgaaaacgctttcgggc
ggacaatcgtttcaggtttcgctgagtttggcactggcgttggcagaaagtgtgcaaaca
aattcgctggcaagtaaaaatttcttttttatcgacgaaggttttggaacacaagatgcc
gaatcggttaatattgtgtttgaaacgctaaacaacctgcacaaagaaaaccgtattgtt
ggaattatttcgcacgttgaagaactaaaagagcgcattccagttgcattacaaatcact
aaaaccgatgaagacggaagtttaattaaagttgtttag
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