Flavobacterium dauae: NU10_01740
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Entry
NU10_01740 CDS
T09251
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fda
Flavobacterium dauae
Pathway
fda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NU10_01740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fda03019
]
NU10_01740
03016 Transfer RNA biogenesis [BR:
fda03016
]
NU10_01740
Enzymes [BR:
fda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NU10_01740
Messenger RNA biogenesis [BR:
fda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NU10_01740
Transfer RNA biogenesis [BR:
fda03016
]
Prokaryotic type
tRNA degradation factors
NU10_01740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
S1
PNPase
KH-I_KHDC4-BBP
KH_KhpA-B
KH_2
DUF2292
Motif
Other DBs
NCBI-ProteinID:
WLD24143
LinkDB
All DBs
Position
complement(365536..367740)
Genome browser
AA seq
734 aa
AA seq
DB search
MIPKVTQEIIDLGGGRTISIETGKLAKQADGSVVVRSGNCMILATAVSAKTANPGVDFLP
LTVDYREKFSAAGRFPGGFFKREARPSDQEILTMRLVDRCLRPLFPDDYHAETQIMLQLM
SFDENVMPDAMAGLAASAALAVSDIPFYNLISEVRVGRVNGELIINPSKQQLDQSDIDMM
IGASKDSVCMVEGEMKEISEAEMVEAIKFAHEAIIVQIEAQEKMRAALSLDYRTYEPEEN
DDTLKAEIHTFAYDKFYAIAAEASAKHERSEKFATLKEELLANFSEETIEEKKELISKYF
SKTQKEAVRNLVLDQGLRLDGRKTTEIRNIWSEVDYLPSAHGSSVFTRGETQALATVTLG
TSREANIIDLPSEQGEERFYLHYNFPPFSTGEAKPLRGVSRREVGHGNLAQRALKNMIPA
DCPYTIRLVSDVLESNGSSSMATVCAGTLALMDAGIQIEKPVSGIAMGLITDGNRFAVLS
DILGDEDHLGDMDFKVTGTKDGITACQMDIKIDGLRYDIMEQALKQAHEGRMHILGKITE
TIAAPKTTVKAHAPKIIKFEIPKDFIGAVIGPGGKNIQALQAETQTTIVITEEGDFGIIE
ILGVSQEGMDKAIQSIQNQTFSPVEGEVYTVKVTKMLEFGAVVEFVPGKDSLLHVSEFDW
KRIENPSDVLKEGDVLDVKYLGLDPKTKKPKVSRKALLPRPPKPEGKPENKGEGKPQNRN
NENKPSNDKKEDNN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgattcctaaagtaacccaagaaattattgatttaggtggtggtagaaccatctcaatc
gaaacaggcaaattagccaaacaagccgatggttctgttgtagttcgttcaggtaactgt
atgattttagcaacggcagtatctgcaaaaaccgcaaacccgggtgtagattttctacca
ttaacggttgattatcgcgaaaaattctcggctgcaggtcgtttcccaggcggattcttt
aaaagagaagcacgcccaagcgatcaggaaattttaacaatgcgtttggttgaccgttgt
ttgcgtccgcttttcccggacgattatcacgccgaaactcaaattatgttgcagttaatg
tcgtttgatgaaaatgtaatgcctgatgcaatggctggtttagcagcatcggcagcctta
gctgtttcagacatccctttctacaaccttatttcagaagttcgcgttggtcgtgtaaac
ggcgaattaatcatcaacccaagcaaacaacaattggatcaatcagacatcgatatgatg
attggtgcttctaaagattcggtttgtatggtagaaggtgagatgaaagaaatttcagaa
gccgaaatggtagaagctattaaatttgcacacgaagcaattatcgttcaaattgaagct
caggaaaaaatgcgtgccgcattatctttagattacagaacatacgaacctgaagaaaat
gacgatacgttaaaagcagaaatacatacttttgcttacgataaattttacgccattgct
gccgaagcaagtgcaaaacacgaacgcagcgaaaaatttgctactttgaaagaagaatta
ttagctaatttttctgaagaaaccatagaagagaaaaaagaattaatttctaaatatttt
tctaaaacacaaaaagaagctgttcgtaacctggttttagatcaaggtttacgtttagac
ggacgtaaaactacagaaatccgtaacatttggagcgaagtagattatttaccatcagca
cacggatcatcggtatttacacgtggtgaaacacaagctttagctactgtaaccttagga
acatcgcgtgaagcaaatattattgatttaccaagcgaacaaggcgaagagcgtttttac
ttacactacaacttccctcctttctctacaggtgaagcaaaaccattacgtggagtatcg
cgtcgcgaagtgggtcacggaaacttggcacaacgtgcattaaaaaacatgattcctgcc
gattgcccttacactattcgtttagtatcagacgtattagaatcaaacggatcatcgtct
atggcaaccgtttgcgccggaacattagcgttgatggatgctggtattcaaattgaaaaa
ccggtttcgggaattgcaatgggattaatcaccgatgggaatcgttttgctgttttatct
gacattttaggagacgaggatcacttaggtgatatggactttaaagttacaggtacaaaa
gacggtatcacggcttgccaaatggatattaagattgatggattgcgttacgacattatg
gaacaagctttaaaacaagcacatgaaggacgtatgcacattttaggaaaaattaccgaa
actattgctgctccaaaaacaactgttaaggcacacgctcctaaaatcattaaatttgaa
attcctaaagattttattggtgcggttattggcccaggtggtaaaaacattcaggcatta
caagcagaaacccaaactactattgtgattacagaggaaggcgattttggaattattgaa
atattaggtgtttcgcaagaaggaatggacaaagcaattcaatcaatccaaaaccaaaca
ttctctccggttgaaggcgaagtttacacagtgaaagttactaaaatgttagaatttggt
gcagtggtagaatttgttccgggtaaagattcattattacacgtatcagaatttgactgg
aaacgcattgaaaatccgtcagatgttttaaaagaaggtgatgttttagacgtgaaatat
ttaggtttggatccaaaaaccaaaaaaccaaaagtatctcgtaaagcgttattgccacgt
ccgccaaaaccggaaggcaaaccagaaaataaaggcgaaggtaaaccacaaaacagaaac
aacgaaaacaaaccttctaacgacaaaaaagaagacaacaactag
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