KEGG   Flavobacterium dauae: NU10_04040
Entry
NU10_04040        CDS       T09251                                 
Symbol
cas9
Name
(GenBank) type II CRISPR RNA-guided endonuclease Cas9
  KO
K09952  CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
Organism
fda  Flavobacterium dauae
Brite
KEGG Orthology (KO) [BR:fda00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:fda02048]
    NU10_04040 (cas9)
Prokaryotic defense system [BR:fda02048]
 CRISPR-Cas system
  Type II CRISPR-Cas system
   Type II signiture cas proteins
    NU10_04040 (cas9)
SSDB
Motif
Pfam: RuvC_III HNH_4 Cas9_a DUF5930 Stork_head
Other DBs
NCBI-ProteinID: WLD24577
LinkDB
Position
853180..857433
AA seq 1417 aa
MKHILGLDLGTNSIGWAIVKEAENDKEQSSIEKIGVRVNPLTTDEQTNFEKGNPITTNAG
RTLGRSARRNLQRFKLRRENLIQILKAQNWISDDTVLAENGNKTTFETFRLRALAAEKQL
ELNELSRVLLQINKKRGYKSSRKVNNTEEGTLIDGMDIAKKLYHENLTPGQFILDLLKSG
KKKVPDFYRSDLQAEFDKIWNFQKQFYPEILTDEFKETIKNKGQKVTSQIFYSTYGFNTA
ENKGTRDKKKLQNYKWRNEALSQQLAKDEVAYILADINGQIYNSSGYLGAISDRSKELYF
NNQTVGQYQYAQLQDNPHARLKNQVFYRQDYMDEFEKIWTIQSKGREAIFTEALKEEIRD
VVIFYQRKLKSQKGLISFCEFEQREIEVNGKKKTVGLRVVPKSSLLFQEFKIWQNLHNVK
LKNKLTKEIYVLSQEDKQMLFNELNLKGNLSASEVLKLLVDKPKDWEINYTSLEGNRTNQ
ALYNAYLTVLENEGYDVREELKLKLKKDDITLADIDKPASEIKEMVQAIFNHLGIKSEIL
DFNAELEGKAFEEQLSFQLWHLLYAYEEDNSPTGMDTLYRLLEQKFGFNKEQAKVIGSVA
FQDDYGSLSSKAIRKIYPFIKENEYSEACVLAGYRHSKHSLTKEEIDKRELKSRLDILPK
NSLRNPVVEKILNQMVNVVNTLIDTENDKLEKEGKSRDFKFDEVRIELARELKKNAKERE
EMTSEINRATIENEKIKSIIKRDFPHIQNPTRNDVIRYKLYEELSINAYKDLYTDTKVDY
HKLFSKEYDIDHIIPQSRLFDDSFSNKVLVPRQSNLDKSNNTAFDYISSKGDNDLLKFQA
VIDSLLKANKISKAKYKKLLMKGAEIGEGFIQRDLRDSQYIAKKAKEILFQITKSVLSTS
GSVTDRLREDWDLVNVMKELNLEKYRLAGLTEMQTTKDGNPKEVIKDWTKRNDHRHHAMD
ALTVAFTKRSFIQYLNNLNARRHDEYDGISNAKDKTSIDTNSLKISSRDALGIEEKETHK
IHDGKGNYKRVFNEPIPSFRQVAKQHLEAVLVSHKAKNKVVTKNINKIKGSDKVQIALTP
RGQMHKETVYGKIKQYAFKEEKVSAKFDESTIALVSNPQYRTLLLQRLVENGNDSKKAFT
GKNALSKNPILLKDGTELPEKVKLMWLEDDYTIRKDIGPDLKIDKVIDEGVKRILQTRLN
EFKGDAKKAFSDLEQNPIWLNEEKGIAIKRVTISGVKNAETLHYKKDHLGKVILDNNGKK
IPVDFVSTGNNHHVAIYEDEKGNLQEKVVSFYEAVVRVNEDLPIVDKLYNQHLGWTFKFT
MKQNEMFIFPSEDFNPNEIDLLDRKNQALISKHLFRVQKFGSLLSGFWFRHHLETTVDVN
NSLKGVTYKVIQSANNLRDLIKVRTNHLGEIIQVGEY
NT seq 4254 nt   +upstreamnt  +downstreamnt
atgaaacatatacttggattagatttaggaacgaattcaattggttgggccattgtaaaa
gaagcagaaaatgacaaagagcaatcatcaatagaaaaaataggcgttcgagtaaatcca
cttacgacggatgagcaaacgaattttgaaaaaggtaatcctattacaacaaatgcaggt
agaactttaggtcgctcggctcgtcgcaatctacaacgttttaaactacgtcgtgaaaat
ctgattcaaattctaaaagctcaaaactggatttctgatgatactgttttagctgaaaac
ggaaataaaacaacttttgaaactttccgattacgtgctttagctgctgaaaagcaattg
gagttaaatgaattatctcgtgtattgttacaaatcaacaaaaagcgtggttacaaaagt
tctcgtaaagtgaacaatacagaagagggtactttaatcgacggaatggatattgctaaa
aagctttatcacgaaaaccttacaccaggtcaatttatattggatttattgaaatctggc
aagaaaaaagtacctgatttttatcgttctgatttgcaagctgaatttgataaaatatgg
aattttcaaaagcaattttatcctgaaattttaaccgatgagtttaaagaaaccataaaa
aataaaggtcaaaaagttacttctcagattttctattcaacttatggttttaatactgct
gaaaataaaggaacaagagataaaaagaagctacagaactataaatggcgtaatgaagcg
ttatctcaacaattagcgaaagatgaagttgcttatattttagcagatattaatggtcaa
atctataattcgtctggttatttaggtgcgatttcggatagaagtaaagaactatatttt
aacaatcaaacggttggtcaatatcaatatgcacaattacaagataatccgcatgctcga
ctgaaaaaccaagttttttatcgtcaagattatatggatgagtttgaaaagatttggacg
attcaatcaaaaggtcgtgaagctatttttacagaagcactaaaagaggaaatccgtgat
gttgttattttttatcaacgaaaattgaaatcacaaaagggtttgatttcgttttgtgaa
tttgaacaacgggagatcgaagtaaatggtaaaaagaaaacagtcggcttacgtgttgta
ccaaaatcttcgcttttatttcaagagttcaaaatctggcaaaatttacataatgtcaaa
cttaaaaataagcttacgaaagaaatctatgttttatctcaagaagataagcaaatgctt
tttaatgaattaaatctaaaaggaaatctttctgcatcagaagttctaaaattattggtt
gacaaaccaaaagattgggaaattaattatacaagtttagaaggcaatcgtaccaatcaa
gccctttacaatgcctatttaaccgttcttgaaaacgaaggttatgatgtgcgtgaagaa
ctgaaattaaaactgaaaaaagacgacattaccttagcggatattgacaaacctgcatct
gaaattaaggaaatggtgcaagctatttttaatcatttaggaattaaatctgaaatctta
gacttcaatgctgaattagaaggaaaggcttttgaagagcaattatctttccaattgtgg
catttgttgtacgcttatgaagaagataattcgcctacagggatggatactttatatcgt
ttgttggaacaaaaatttggtttcaataaagaacaagccaaagtaattggttcggttgct
tttcaggatgattacgggagtttaagcagtaaagctattcgaaagatttatccattcatc
aaggaaaatgaatatagtgaggcttgtgttttggcaggataccgtcattctaaacattct
ttgactaaagaagaaattgataagcgtgagctaaaatctcgtttggatatacttccaaaa
aatagtttgcgaaatcctgtggtggagaaaatattgaaccaaatggtcaatgtggtaaat
actttaattgataccgaaaatgataaattagaaaaagagggtaaatcaagagattttaag
tttgatgaagttcgtattgaattagcgcgtgaattaaagaaaaatgcaaaagagcgtgag
gaaatgacaagtgaaataaatcgtgcaacaattgaaaacgaaaaaataaaatcgataata
aaaagagattttcctcatattcaaaacccaacaagaaacgatgttattagatataaattg
tacgaggaactttctattaatgcatataaagatctatatacagacaccaaagtagattac
cacaaattatttagtaaagaatatgatatagaccatattatccctcaatcgcgtttgttt
gatgatagtttttctaacaaagttttagtaccaagacaatctaatttagataaaagtaat
aatacagcatttgactatataagctctaaaggagataatgatcttttaaagtttcaagca
gttatagattctttattaaaagcaaataaaatctctaaagctaaatacaaaaagctgttg
atgaaaggagctgaaattggcgaaggttttattcaaagagatttacgtgattcacaatat
attgcgaaaaaagccaaagaaattctatttcagattactaaatcggtgctttctacttcg
ggttcggtaaccgaccgtttacgcgaagattgggatttggtcaatgtgatgaaagaattg
aatttggaaaaataccgtttggcaggtttgacagaaatgcaaactacaaaagatggaaat
ccgaaagaagtcatcaaagattggacaaagcgtaacgatcatcgtcatcatgccatggat
gctttaacagtagcttttactaaacgaagttttatacaatatttaaacaatttgaatgcg
cgtagacatgatgaatatgatggtatttctaatgcaaaagacaaaacatcaattgatacg
aatagtttaaaaatttcgagtagagatgctttaggaatcgaagaaaaagaaacgcataaa
atacatgatggaaaaggaaattacaagcgtgtatttaatgaaccaattccaagtttcaga
caagttgcaaaacaacatttagaagctgttttggtgtcgcataaagctaagaacaaagtt
gtaacgaagaatatcaataaaataaaaggaagtgataaagttcagattgctttaactcca
cgtggacaaatgcacaaggaaaccgtttatggcaaaatcaaacaatatgcatttaaagaa
gaaaaagtttcagcaaagtttgatgaatcaacgattgccttggtttcaaatccacagtat
cgtacacttttattacaacgtttagtcgaaaatggaaatgattctaaaaaagcttttaca
ggtaaaaatgcgttgtcaaaaaatccaattttactaaaagatggaacagaattacctgaa
aaagtaaaattgatgtggttggaagatgattatacgattcgaaaagatattggaccagat
ttgaaaattgataaagtgattgatgaaggtgtaaaacgaatcctacaaactcgattaaat
gaatttaaaggcgatgctaaaaaagctttttcagatttagagcaaaatccaatttggtta
aatgaagaaaagggaattgcaataaaacgagtaactatttcaggggtcaaaaatgcagaa
actttgcattataaaaaagaccatttaggaaaagtgattttagataataatggaaagaaa
attccggttgattttgtaagtactgggaataatcatcacgtagccatttatgaagacgaa
aaaggtaatttacaagaaaaagttgtttcgttttatgaagctgttgttcgtgtaaatgag
gatttgcctattgtagataaattgtataatcaacatttaggttggacgtttaagtttaca
atgaaacaaaatgaaatgttcatttttccttcagaagattttaatccaaatgaaattgac
ttgttagatagaaaaaatcaagctttgattagtaaacatttgtttagggtgcagaaattc
ggatctctactttcgggtttttggtttagacatcatttagaaacaactgttgatgtgaat
aacagtttaaaaggagttacttataaggttattcaaagtgctaataatttgagagattta
ataaaagtccgcacaaatcatttaggagaaattatacaagttggggaatattaa

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