KEGG   Flavobacterium dauae: NU10_04140
Entry
NU10_04140        CDS       T09251                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
fda  Flavobacterium dauae
Pathway
fda03030  DNA replication
fda03430  Mismatch repair
fda03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fda00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NU10_04140
   03430 Mismatch repair
    NU10_04140
   03440 Homologous recombination
    NU10_04140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fda03032]
    NU10_04140
   03400 DNA repair and recombination proteins [BR:fda03400]
    NU10_04140
Enzymes [BR:fda01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NU10_04140
DNA replication proteins [BR:fda03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NU10_04140
DNA repair and recombination proteins [BR:fda03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NU10_04140
SSDB
Motif
Pfam: RNase_T ExoX-like_C RNase_H_2 DNA_pol_B_exo1
Other DBs
NCBI-ProteinID: WLD24595
LinkDB
Position
883087..883860
AA seq 257 aa
MELKLNRPICFFDLETTGIDVAKDRIVEISILKIFPNGNKESKTWLVNPTVSIPAHATAV
HGITNEKVANEPTFKELAGQVYNMIKDADLAGYNSDRFDIPLLVEELLRADVDFDMKNRV
SVDVQTIFHKKEERTLSAALKFYCNQSLENAHSAAADTEATYEILKAQLDRYEDLENDMK
ALSVFTTRKKSVDFAGFIALNDNGEEIFTFGKHKGALVDDVLDREPGYFGWIQNADFPLY
TKKVLTGIKLRKLTNKF
NT seq 774 nt   +upstreamnt  +downstreamnt
atggaattaaaattaaaccgcccgatttgctttttcgatttagaaacaacgggaatagat
gtagcaaaagatagaattgtagaaatatcgatactaaaaatttttccgaacggaaataaa
gaaagcaaaacctggctggtaaacccaacggtttcaattcctgcacacgcaacggctgtt
cacggaattacaaatgaaaaagtagcgaacgaacccacttttaaagaactggcaggtcaa
gtttacaatatgattaaagatgccgatttggctggatacaattcagaccgattcgacatt
cctttgttggtagaagaattattgcgtgccgatgttgattttgatatgaaaaaccgtgtt
tcggttgatgtgcaaacgatctttcataaaaaagaagaacgtacgttaagtgctgcgtta
aagttttattgcaatcaatcgttagaaaatgcacattctgcagcagccgataccgaagct
acgtacgaaattttaaaggcgcagttagatcgttacgaagatttagaaaacgatatgaaa
gctctttcggtattcactactcgtaaaaaatcggtcgattttgcaggatttatcgccttg
aatgataatggagaagaaatttttacattcggtaaacataaaggagctttggttgatgat
gttttagatcgcgaaccgggttactttggttggatacaaaatgccgattttccgttgtac
acaaaaaaagtactgacaggaatcaagttgcgtaaactaactaataagttttag

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