Flavobacterium dauae: NU10_05920
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Entry
NU10_05920 CDS
T09251
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
fda
Flavobacterium dauae
Pathway
fda00220
Arginine biosynthesis
fda00240
Pyrimidine metabolism
fda00250
Alanine, aspartate and glutamate metabolism
fda01100
Metabolic pathways
fda01110
Biosynthesis of secondary metabolites
fda01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
fda00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
NU10_05920 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NU10_05920 (carB)
00220 Arginine biosynthesis
NU10_05920 (carB)
Enzymes [BR:
fda01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
NU10_05920 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
GARS_A
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_5
RimK
ATP-grasp_2
GapR_DNA-bd
DUF4833
Motif
Other DBs
NCBI-ProteinID:
WLD24916
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All DBs
Position
complement(1209325..1212174)
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AA seq
949 aa
AA seq
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MPKDNSIKTVLIIGSGPIIIGQACEFDYSGSQSARSLREEGIKVILINSNPATIMTDPSM
ADHVYLKPLNTKSIIEILKAHPEIDAVLPTMGGQTALNLCLEADEKGIWQDFDVKLIGVD
INAINVTEDREQFKQLLAKIDIPFAPAKTATSFLEGKEVAQEFGFPLVIRPSFTLGGTGA
AFVHKEEDFDGLLTYGLEASPIHEVLIDKALLGWKEYELELLRDKNDNVVIICTIENMDA
MGIHTGDSITVAPAMTLSDRTFQRMRDMAIKMMRSIGNFAGGCNVQFAVSPDEKEDIVAI
EINPRVSRSSALASKATGYPIAKIATKLALGYTLDELQNQITKSTSALFEPTLDYVIVKI
PRWNFDKFEGADRTLGLQMKSVGEVMGIGRSFQEALQKATQSLEIKRNGIGADGKGYTNY
DQILDKLEHASWDRVFVIYDAIALGIPLSTIHQITKIDMWFLKQYEEMYALEQEVSKHTL
ASLPKDLLLEAKQKGFADRQIAHMLRCLESEIHALREQMNINRVYKLVDTCAAEFVAQTP
YYYSTFEADIEKADGTTYSANESVRTDKKKIVVLGSGPNRIGQGIEFDYSCVHGVLAASE
SGYETIMINCNPETVSTDFDTADKLYFEPVYWEHIYDIIRHEKPEGVIVQLGGQTALKLA
EKLDKYGIKIIGTSYEALDLAEDRGRFSELLTELNIPFPKFGVATTADEASKLADELDFP
LLVRPSYVLGGQGMKIVINKKELEEHVIDLLKSIPGNKLLLDHYLAGAIEAEADAICDGE
NVYIIGIMEHIEPCGVHSGDSNATLPPFNLGEFVLQQIKDHTKKIAVALKTKGLINIQFA
VKDDTVYIIEANPRASRTVPFIAKAYGEPYVNYATKVMLGAKVTDFTFNPKLDGYAIKQP
VFSFNKFPGVNKALGPEMKSTGESILFIDSLKDDAFYDLYTRRKMYLSK
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagataattcaattaaaacagttttaatcattggttctggtccaatcattatt
ggtcaggcttgtgagtttgactattcagggtcgcaatcggcacgttctttacgtgaagaa
ggaatcaaagtaatcttgatcaattcaaatcctgcaaccatcatgaccgatccttccatg
gcggatcatgtatatttaaagcctttaaataccaaatcgatcattgaaattttaaaggcg
catccagaaatcgatgctgttttgccaacaatgggcggacaaacagccttgaatttgtgt
ttagaagccgatgaaaaaggtatttggcaagattttgatgtaaaattgattggggttgat
atcaacgccattaatgtcactgaagaccgcgaacaatttaaacaacttttagcaaaaatc
gatattccttttgcacctgcaaaaactgccacatcgtttttggaaggaaaagaagttgcc
caagaatttggtttcccgttggtaattcgtccatcgtttacgttaggtggaacaggtgct
gcttttgtacacaaagaagaagattttgatggtttactaacctacggtttagaagcatcg
ccaattcacgaagtattgattgacaaagcgttgttgggctggaaagaatacgaattagag
ttattgcgcgataaaaacgacaacgttgtaattatctgtaccattgaaaacatggatgcc
atgggaatccacacgggtgattctattacggtggcgcctgcaatgacactgtcagaccgt
acgttccaacgtatgcgcgatatggcaataaaaatgatgcgttctattggtaattttgcc
ggcggatgtaacgttcagtttgctgtatctccagacgaaaaagaagacattgtggcaatt
gaaattaatccgcgtgtatctcgttcatctgcattggcatcaaaagcaactggatatcca
attgctaaaatcgcaacaaaactggcgttaggttatacgttagatgaattacaaaatcaa
attacaaaatcaacctcagctttatttgaaccaactttagattatgttattgtaaaaata
cctcgttggaattttgataaatttgaaggtgccgacagaacacttggtcttcaaatgaaa
tcggttggtgaagttatgggaattggtcgttcatttcaagaagccttacaaaaagcaaca
caatctttagaaataaaacgtaacggaattggtgcagacggtaaaggatacacgaattac
gaccagattttagataaattagagcatgcttcatgggaccgcgttttcgtgatttacgat
gctattgctttaggaattccgttaagtaccattcatcagattacaaaaatcgacatgtgg
ttcttaaaacagtacgaagaaatgtatgctttagagcaagaagtttctaaacacacgttg
gcttcattacctaaagatttgttgttagaagcgaaacaaaaaggttttgcagaccgccaa
attgcacacatgttgcgttgtttagaaagcgaaattcatgcattgcgcgaacaaatgaac
ataaaccgagtttataaattggttgatacgtgtgcggctgaattcgtagctcaaactcct
tattattactcgacttttgaagcagatatcgaaaaagcagacggaactacttattctgca
aacgaatctgttcgtaccgataaaaagaaaatcgttgttttaggatcgggaccaaaccga
attggacaaggtattgaatttgattattcttgtgtacacggcgttttagcagcatcagaa
agtggttacgaaaccatcatgatcaactgtaatccggaaacggtttcaaccgattttgat
acggctgataaattatattttgaacctgtttattgggaacatatatacgatattattcgt
catgaaaaaccagagggagtaattgtacagttaggcggacaaactgctttaaagttggcc
gaaaaattagataaatacggaataaaaatcattggaacaagctacgaagctttagattta
gctgaagatcgcgggcgtttctctgaattgttaaccgaattaaatataccgttccctaaa
tttggtgtggcaaccactgcagacgaagcatcgaaattagctgacgagttagattttcca
cttttggttcgtccatcttacgttttaggtggtcagggaatgaaaatcgttatcaacaaa
aaagaattagaagagcacgtaattgatttattaaaatcgattcctggtaacaaattgttg
ttagaccattatttagctggagccatagaagcagaagctgatgctatttgcgatggtgaa
aatgtttacataattggaattatggaacacattgaaccatgtggcgttcactctggcgat
tcaaatgcaacattgcctccgtttaatttaggtgaatttgttttacagcaaattaaagac
catactaaaaagattgcggttgccttaaaaacaaaaggtttaattaacatacagtttgcc
gttaaagatgatacagtttatattatcgaagcaaatccacgtgcatctcgtacggttccg
tttattgccaaagcttacggcgaaccttatgtaaactatgctacaaaggtaatgttgggt
gcaaaagttaccgattttacttttaatcctaaattagatggatatgctataaagcaacct
gttttctctttcaacaagttccctggtgtaaacaaagcattaggaccagagatgaaatca
accggagaaagtatcttattcatcgacagtttaaaagacgatgcgttctacgatttatac
actcgcagaaaaatgtacttaagtaaataa
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